RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
ACTN1-219ENST00000556432 NFIXQ14938 502 aa19.11■□□□□ 0.65
ACTN1-219ENST00000556432 C2CD5Q86YS7 1000 aa19.1■□□□□ 0.65
ACTN1-219ENST00000556432 TIAM2Q8IVF5 1701 aa19.1■□□□□ 0.65
ACTN1-219ENST00000556432 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
ACTN1-219ENST00000556432 DPY19L2Q6NUT2 758 aa19.09■□□□□ 0.65
ACTN1-219ENST00000556432 COL15A1P39059 1388 aa19.08■□□□□ 0.65
ACTN1-219ENST00000556432 H0YIN7 160 aa19.08■□□□□ 0.64
ACTN1-219ENST00000556432 SERPINB2P05120 415 aa19.08■□□□□ 0.64
ACTN1-219ENST00000556432 NARFQ9UHQ1 456 aa19.08■□□□□ 0.64
ACTN1-219ENST00000556432 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.64
ACTN1-219ENST00000556432 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
ACTN1-219ENST00000556432 NFKBIEO00221 500 aa19.06■□□□□ 0.64
ACTN1-219ENST00000556432 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-219ENST00000556432 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
ACTN1-219ENST00000556432 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-219ENST00000556432 MKRN1Q9UHC7 482 aaKnown RBP19.06■□□□□ 0.64
ACTN1-219ENST00000556432 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
ACTN1-219ENST00000556432 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
ACTN1-219ENST00000556432 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.642e-7■□□□□ 10.2
ACTN1-219ENST00000556432 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
ACTN1-219ENST00000556432 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
ACTN1-219ENST00000556432 DLEC1Q9Y238 1755 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 CCDC88AQ3V6T2 1871 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 ERFEQ4G0M1 354 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 AKAP4Q5JQC9 854 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 CARMIL3Q8ND23 1372 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
ACTN1-219ENST00000556432 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
ACTN1-219ENST00000556432 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
ACTN1-219ENST00000556432 POTECB2RU33 542 aa19.02■□□□□ 0.64
ACTN1-219ENST00000556432 PANK3Q9H999 370 aa19.02■□□□□ 0.64
ACTN1-219ENST00000556432 BCL2L12Q9HB09 334 aa19.02■□□□□ 0.64
ACTN1-219ENST00000556432 LGR6Q9HBX8 967 aa19.02■□□□□ 0.64
ACTN1-219ENST00000556432 CREBZFQ9NS37 354 aa19.02■□□□□ 0.64
ACTN1-219ENST00000556432 C21orf2O43822 256 aa19.01■□□□□ 0.63
ACTN1-219ENST00000556432 CHADLQ6NUI6 762 aa19.01■□□□□ 0.63
ACTN1-219ENST00000556432 NPHP1O15259 732 aa19■□□□□ 0.63
ACTN1-219ENST00000556432 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
ACTN1-219ENST00000556432 AIDAQ96BJ3 306 aa18.99■□□□□ 0.63
ACTN1-219ENST00000556432 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-219ENST00000556432 IL13P35225 146 aa18.98■□□□□ 0.63
ACTN1-219ENST00000556432 PDE6BP35913 854 aa18.98■□□□□ 0.63
ACTN1-219ENST00000556432 CCDC24Q8N4L8 307 aa18.98■□□□□ 0.63
ACTN1-219ENST00000556432 TAOK3Q9H2K8 898 aa18.98■□□□□ 0.63
ACTN1-219ENST00000556432 A0A087WZG4 1122 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 FOXN1O15353 648 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 STARD3NLO95772 234 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 POTEIP0CG38 1075 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 MRC1P22897 1456 aa18.97■□□□□ 0.63
ACTN1-219ENST00000556432 DDNO94850 711 aaPredicted RBP18.96■□□□□ 0.63
ACTN1-219ENST00000556432 HMOX1P09601 288 aa18.96■□□□□ 0.63
ACTN1-219ENST00000556432 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
ACTN1-219ENST00000556432 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
ACTN1-219ENST00000556432 BRIP1Q9BX63 1249 aa18.96■□□□□ 0.63
ACTN1-219ENST00000556432 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
ACTN1-219ENST00000556432 CNTNAP1P78357 1384 aa18.94■□□□□ 0.62
ACTN1-219ENST00000556432 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
ACTN1-219ENST00000556432 IQCA1LA6NCM1 817 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 CTCFP49711 727 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-219ENST00000556432 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
ACTN1-219ENST00000556432 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 TBC1D2BQ9UPU7 963 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
ACTN1-219ENST00000556432 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
ACTN1-219ENST00000556432 DICER1Q9UPY3 1922 aaKnown RBP18.92■□□□□ 0.62
ACTN1-219ENST00000556432 COL11A2P13942 1736 aaPredicted RBP18.92■□□□□ 0.62
ACTN1-219ENST00000556432 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
ACTN1-219ENST00000556432 LDHDQ86WU2 507 aa18.92■□□□□ 0.62
ACTN1-219ENST00000556432 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
ACTN1-219ENST00000556432 LTBP3Q9NS15 1303 aa18.92■□□□□ 0.62
ACTN1-219ENST00000556432 FER1L6Q2WGJ9 1857 aa18.92■□□□□ 0.62
ACTN1-219ENST00000556432 ST5P78524 1137 aa18.91■□□□□ 0.62
ACTN1-219ENST00000556432 MTHFSDQ2M296 383 aaKnown RBP18.91■□□□□ 0.62
ACTN1-219ENST00000556432 EAPPQ56P03 285 aaPredicted RBP18.91■□□□□ 0.62
ACTN1-219ENST00000556432 SOGA3Q5TF21 947 aa18.91■□□□□ 0.62
ACTN1-219ENST00000556432 VEGFBP49765 207 aa18.9■□□□□ 0.62
ACTN1-219ENST00000556432 SETDB2Q96T68 719 aa18.9■□□□□ 0.62
ACTN1-219ENST00000556432 VIRMAQ69YN4 1812 aaKnown RBP18.9■□□□□ 0.62
ACTN1-219ENST00000556432 SCN7AQ01118 1682 aa18.89■□□□□ 0.61
ACTN1-219ENST00000556432 TMEM88BA6NKF7 163 aa18.89■□□□□ 0.61
ACTN1-219ENST00000556432 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.61
ACTN1-219ENST00000556432 STYK1Q6J9G0 422 aa18.89■□□□□ 0.61
ACTN1-219ENST00000556432 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
ACTN1-219ENST00000556432 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
ACTN1-219ENST00000556432 TEFQ10587 303 aa18.88■□□□□ 0.61
ACTN1-219ENST00000556432 TAF1DQ9H5J8 278 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-219ENST00000556432 PASKQ96RG2 1323 aa18.88■□□□□ 0.61
ACTN1-219ENST00000556432 UBR2Q8IWV8 1755 aa18.88■□□□□ 0.61
ACTN1-219ENST00000556432 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
ACTN1-219ENST00000556432 LBX1P52954 281 aa18.87■□□□□ 0.61
ACTN1-219ENST00000556432 MASTLQ96GX5 879 aa18.87■□□□□ 0.61
ACTN1-219ENST00000556432 ZNF496Q96IT1 587 aaPredicted RBP18.87■□□□□ 0.61
ACTN1-219ENST00000556432 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
ACTN1-219ENST00000556432 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
ACTN1-219ENST00000556432 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms