RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	DCAF5	Q96JK2	942 aa		12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	CAMKK2	Q96RR4	588 aa		12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.01	□□□□□ -0.49
HNRNPC-223	ENST00000556142	GIGYF1	O75420	1035 aa	Predicted RBP	12	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SAMD1	Q6SPF0	538 aa	Predicted RBP	12	□□□□□ -0.49
HNRNPC-223	ENST00000556142	CHMP4B	Q9H444	224 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SCN11A	Q9UI33	1791 aa		12	□□□□□ -0.49
HNRNPC-223	ENST00000556142	VIRMA	Q69YN4	1812 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-223	ENST00000556142	HSP90AB1	P08238	724 aa	Known RBP	11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	IL2RB	P14784	551 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	HDGFL1	Q5TGJ6	251 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	ZCRB1	Q8TBF4	217 aa	Known RBP	11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	STK31	Q9BXU1	1019 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	STRN4	Q9NRL3	753 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SPATA31A5	Q5VU36	1347 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SPATA31A7	Q8IWB4	1347 aa		11.99	□□□□□ -0.49
HNRNPC-223	ENST00000556142	COL14A1	Q05707	1796 aa	Known RBP	11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	TRIM37	O94972	964 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	EVA1C	P58658	441 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	FLII	Q13045	1269 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SIRT2	Q8IXJ6	389 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SMC5	Q8IY18	1101 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	NFATC2IP	Q8NCF5	419 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	THSD7A	Q9UPZ6	1657 aa		11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PARP4	Q9UKK3	1724 aa	Known RBP	11.98	□□□□□ -0.49
HNRNPC-223	ENST00000556142	APBA3	O96018	575 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	ZNF790	Q6PG37	636 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	FAM196A	Q6ZSG2	479 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	NECTIN2	Q92692	538 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PDZRN3	Q9UPQ7	1066 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PCDH11X	Q9BZA7	1347 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PCDH11Y	Q9BZA8	1340 aa		11.97	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PRAMEF22	A3QJZ6	481 aa		11.96	□□□□□ -0.49
HNRNPC-223	ENST00000556142		F6X3S4	739 aa		11.96	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PHAX	Q9H814	394 aa	Known RBP	11.96	□□□□□ -0.49
HNRNPC-223	ENST00000556142	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.96	□□□□□ -0.49
HNRNPC-223	ENST00000556142	SHANK3	Q9BYB0	1731 aa		11.96	□□□□□ -0.49
HNRNPC-223	ENST00000556142	EIF2S2	P20042	333 aa	Known RBP	11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	PDE4A	P27815	886 aa		11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CCT4	P50991	539 aa	Known RBP	11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	SLC39A6	Q13433	755 aa		11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	NBPF14	Q5TI25	921 aa		11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CHMP4A	Q9BY43	222 aa		11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	BACH2	Q9BYV9	841 aa		11.96	□□□□□ -0.5
HNRNPC-223	ENST00000556142	C1orf115	Q9H7X2	142 aa		11.95	□□□□□ -0.5
HNRNPC-223	ENST00000556142	SPON1	Q9HCB6	807 aa		11.95	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CHPF2	Q9P2E5	772 aa		11.95	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ERVV-2	B6SEH9	535 aa		11.94	□□□□□ -0.5
HNRNPC-223	ENST00000556142	PDIA6	Q15084	440 aa		11.94	□□□□□ -0.5
HNRNPC-223	ENST00000556142	MEIS3	Q99687	375 aa		11.94	□□□□□ -0.5
HNRNPC-223	ENST00000556142	PXDNL	A1KZ92	1463 aa		11.94	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ATP10D	Q9P241	1426 aa		11.94	□□□□□ -0.5
HNRNPC-223	ENST00000556142	RGS3	P49796	1198 aa		11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CABP4	P57796	275 aa		11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	FKBP5	Q13451	457 aa	Predicted RBP	11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ZNF496	Q96IT1	587 aa	Predicted RBP	11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	DBF4	Q9UBU7	674 aa	Predicted RBP	11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	RREB1	Q92766	1687 aa		11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	SPATA31A1	Q5TZJ5	1347 aa		11.93	□□□□□ -0.5
HNRNPC-223	ENST00000556142	KCNQ2	O43526	872 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	PROSER3	Q2NL68	480 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ANKRD44	Q8N8A2	993 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CACNA1F	O60840	1977 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	NUP188	Q5SRE5	1749 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ANXA1	P04083	346 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	NUCB1	Q02818	461 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	C8orf34	Q49A92	452 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	CEP85	Q6P2H3	762 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	SLC4A10	Q6U841	1118 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	LRP10	Q7Z4F1	713 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	GCC1	Q96CN9	775 aa		11.92	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ADCY9	O60503	1353 aa		11.91	□□□□□ -0.5
HNRNPC-223	ENST00000556142	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
HNRNPC-223	ENST00000556142	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	ABCB7	O75027	752 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	MYCN	P04198	464 aa	Predicted RBP	11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	SNRPA1	P09661	255 aa	Known RBP	11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	BEND3	Q5T5X7	828 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	DDX54	Q8TDD1	881 aa	Known RBP	11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	FMNL2	Q96PY5	1086 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	DCTPP1	Q9H773	170 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	HYPK	Q9NX55	129 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	USP35	Q9P2H5	1018 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	USP16	Q9Y5T5	823 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	C5	P01031	1676 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	PAPPA	Q13219	1627 aa		11.9	□□□□□ -0.5
HNRNPC-223	ENST00000556142	TNS2	Q63HR2	1409 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	PI4KAP2	A4QPH2	592 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	FAM161A	Q3B820	660 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	PI4KAP1	Q8N8J0	262 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	DNAAF4	Q8WXU2	420 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	USP44	Q9H0E7	712 aa		11.89	□□□□□ -0.51
HNRNPC-223	ENST00000556142	KCP	Q6ZWJ8	1503 aa		11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	KSR2	Q6VAB6	950 aa		11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	CHD1L	Q86WJ1	897 aa		11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	TTC5	Q8N0Z6	440 aa		11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	THRAP3	Q9Y2W1	955 aa	Known RBP	11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	TOGARAM1	Q9Y4F4	1720 aa		11.88	□□□□□ -0.51
HNRNPC-223	ENST00000556142	GNAI2	P04899	355 aa		11.88	□□□□□ -0.51

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