RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZPR1O75312 459 aa26.51■■□□□ 1.83
PRKCH-219ENST00000555906 TTC5Q8N0Z6 440 aa26.51■■□□□ 1.83
PRKCH-219ENST00000555906 CEMIPQ8WUJ3 1361 aa26.5■■□□□ 1.83
PRKCH-219ENST00000555906 POLRMTO00411 1230 aaKnown RBP26.5■■□□□ 1.83
PRKCH-219ENST00000555906 USPL1Q5W0Q7 1092 aa26.5■■□□□ 1.83
PRKCH-219ENST00000555906 TEFQ10587 303 aa26.49■■□□□ 1.83
PRKCH-219ENST00000555906 NARFQ9UHQ1 456 aa26.49■■□□□ 1.83
PRKCH-219ENST00000555906 KCNA3P22001 575 aa26.48■■□□□ 1.83
PRKCH-219ENST00000555906 TM4SF1P30408 202 aa26.48■■□□□ 1.83
PRKCH-219ENST00000555906 IL17REQ8NFR9 667 aa26.48■■□□□ 1.83
PRKCH-219ENST00000555906 RSPH6AQ9H0K4 717 aa26.48■■□□□ 1.83
PRKCH-219ENST00000555906 HEG1Q9ULI3 1381 aa26.47■■□□□ 1.83
PRKCH-219ENST00000555906 FCHSD2O94868 740 aa26.47■■□□□ 1.83
PRKCH-219ENST00000555906 ZNF526Q8TF50 670 aaPredicted RBP26.47■■□□□ 1.83
PRKCH-219ENST00000555906 PRKAR2BP31323 418 aa26.46■■□□□ 1.83
PRKCH-219ENST00000555906 ZNF790Q6PG37 636 aa26.46■■□□□ 1.83
PRKCH-219ENST00000555906 CEP350Q5VT06 3117 aa26.46■■□□□ 1.83
PRKCH-219ENST00000555906 STARD3NLO95772 234 aa26.45■■□□□ 1.82
PRKCH-219ENST00000555906 PIM2Q9P1W9 311 aa26.45■■□□□ 1.82
PRKCH-219ENST00000555906 BCORQ6W2J9 1755 aa26.44■■□□□ 1.82
PRKCH-219ENST00000555906 PPP2R1AP30153 589 aa26.44■■□□□ 1.82
PRKCH-219ENST00000555906 ZNF496Q96IT1 587 aaPredicted RBP26.44■■□□□ 1.82
PRKCH-219ENST00000555906 NUDCQ9Y266 331 aa26.44■■□□□ 1.82
PRKCH-219ENST00000555906 NFIXQ14938 502 aa26.43■■□□□ 1.82
PRKCH-219ENST00000555906 ARHGAP27Q6ZUM4 889 aa26.42■■□□□ 1.82
PRKCH-219ENST00000555906 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
PRKCH-219ENST00000555906 BCL2L12Q9HB09 334 aa26.42■■□□□ 1.82
PRKCH-219ENST00000555906 SBF1O95248 1867 aa26.41■■□□□ 1.82
PRKCH-219ENST00000555906 CANXP27824 592 aaKnown RBP26.41■■□□□ 1.82
PRKCH-219ENST00000555906 EIF5P55010 431 aaKnown RBP26.41■■□□□ 1.82
PRKCH-219ENST00000555906 DALRD3Q5D0E6 543 aaKnown RBP26.41■■□□□ 1.82
PRKCH-219ENST00000555906 TEX13AQ9BXU3 409 aaPredicted RBP26.41■■□□□ 1.82
PRKCH-219ENST00000555906 A0A087WZG4 1122 aa26.4■■□□□ 1.82
PRKCH-219ENST00000555906 FMNL2Q96PY5 1086 aa26.4■■□□□ 1.82
PRKCH-219ENST00000555906 ANKRD31Q8N7Z5 1873 aa26.39■■□□□ 1.82
PRKCH-219ENST00000555906 CHRNA5P30532 468 aa26.39■■□□□ 1.82
PRKCH-219ENST00000555906 U2AF1L5P0DN76 240 aaPredicted RBP26.38■■□□□ 1.81
PRKCH-219ENST00000555906 U2AF1Q01081 240 aaKnown RBP eCLIP26.38■■□□□ 1.81
PRKCH-219ENST00000555906 KIF3CO14782 793 aa26.37■■□□□ 1.81
PRKCH-219ENST00000555906 DLG5Q8TDM6 1919 aa26.36■■□□□ 1.81
PRKCH-219ENST00000555906 COL11A2P13942 1736 aaPredicted RBP26.36■■□□□ 1.81
PRKCH-219ENST00000555906 LAMB4A4D0S4 1761 aa26.35■■□□□ 1.81
PRKCH-219ENST00000555906 CARMIL3Q8ND23 1372 aa26.35■■□□□ 1.81
PRKCH-219ENST00000555906 BTBD11A6QL63 1104 aa26.35■■□□□ 1.81
PRKCH-219ENST00000555906 SERPINB2P05120 415 aa26.35■■□□□ 1.81
PRKCH-219ENST00000555906 IL6STP40189 918 aaPredicted RBP26.35■■□□□ 1.81
PRKCH-219ENST00000555906 TNRC6CQ9HCJ0 1690 aaKnown RBP26.34■■□□□ 1.81
PRKCH-219ENST00000555906 C9orf131Q5VYM1 1079 aa26.32■■□□□ 1.8
PRKCH-219ENST00000555906 RTF1Q92541 710 aaKnown RBP26.32■■□□□ 1.8
PRKCH-219ENST00000555906 KCNQ3O43525 872 aa26.31■■□□□ 1.8
PRKCH-219ENST00000555906 HSPA6P17066 643 aa26.31■■□□□ 1.8
PRKCH-219ENST00000555906 TIAM2Q8IVF5 1701 aa26.31■■□□□ 1.8
PRKCH-219ENST00000555906 KDM3BQ7LBC6 1761 aa26.3■■□□□ 1.8
PRKCH-219ENST00000555906 ZNF330Q9Y3S2 320 aaPredicted RBP26.3■■□□□ 1.8
PRKCH-219ENST00000555906 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
PRKCH-219ENST00000555906 TBC1D9BQ66K14 1250 aa26.29■■□□□ 1.8
PRKCH-219ENST00000555906 MCM10Q7L590 875 aa26.29■■□□□ 1.8
PRKCH-219ENST00000555906 ARFGEF2Q9Y6D5 1785 aa26.28■■□□□ 1.8
PRKCH-219ENST00000555906 A1BGP04217 495 aa26.28■■□□□ 1.8
PRKCH-219ENST00000555906 BICDL1Q6ZP65 573 aa26.28■■□□□ 1.8
PRKCH-219ENST00000555906 NPM2Q86SE8 214 aaKnown RBP26.28■■□□□ 1.8
PRKCH-219ENST00000555906 TBC1D2BQ9UPU7 963 aa26.28■■□□□ 1.8
PRKCH-219ENST00000555906 RNF181Q9P0P0 153 aa26.27■■□□□ 1.8
PRKCH-219ENST00000555906 CCDC88AQ3V6T2 1871 aa26.27■■□□□ 1.8
PRKCH-219ENST00000555906 CAMTA2O94983 1202 aa26.26■■□□□ 1.79
PRKCH-219ENST00000555906 C2CD5Q86YS7 1000 aa26.26■■□□□ 1.79
PRKCH-219ENST00000555906 CACNA1SQ13698 1873 aa26.25■■□□□ 1.79
PRKCH-219ENST00000555906 ZC3H4Q9UPT8 1303 aaKnown RBP26.25■■□□□ 1.79
PRKCH-219ENST00000555906 TTLL6Q8N841 843 aa26.25■■□□□ 1.79
PRKCH-219ENST00000555906 NMRK2Q9NPI5 230 aa26.25■■□□□ 1.79
PRKCH-219ENST00000555906 PDZRN3Q9UPQ7 1066 aa26.25■■□□□ 1.79
PRKCH-219ENST00000555906 H0YIN7 160 aa26.24■■□□□ 1.79
PRKCH-219ENST00000555906 TOMM70O94826 608 aa26.24■■□□□ 1.79
PRKCH-219ENST00000555906 SNRPA1P09661 255 aaKnown RBP26.24■■□□□ 1.79
PRKCH-219ENST00000555906 PRR5LQ6MZQ0 368 aa26.24■■□□□ 1.79
PRKCH-219ENST00000555906 USP16Q9Y5T5 823 aa26.24■■□□□ 1.79
PRKCH-219ENST00000555906 FER1L6Q2WGJ9 1857 aa26.23■■□□□ 1.79
PRKCH-219ENST00000555906 DCTN1Q14203 1278 aa26.23■■□□□ 1.79
PRKCH-219ENST00000555906 DZIP3Q86Y13 1208 aaKnown RBP26.23■■□□□ 1.79
PRKCH-219ENST00000555906 KDM2BQ8NHM5 1336 aa26.22■■□□□ 1.79
PRKCH-219ENST00000555906 RASSF7Q02833 373 aa26.22■■□□□ 1.79
PRKCH-219ENST00000555906 BRIP1Q9BX63 1249 aa26.22■■□□□ 1.79
PRKCH-219ENST00000555906 DICER1Q9UPY3 1922 aaKnown RBP26.22■■□□□ 1.79
PRKCH-219ENST00000555906 PRAMEF22A3QJZ6 481 aa26.21■■□□□ 1.79
PRKCH-219ENST00000555906 NEFMP07197 916 aa26.21■■□□□ 1.79
PRKCH-219ENST00000555906 PDE6BP35913 854 aa26.21■■□□□ 1.79
PRKCH-219ENST00000555906 CNBD1Q8NA66 436 aa26.2■■□□□ 1.78
PRKCH-219ENST00000555906 SETDB2Q96T68 719 aa26.2■■□□□ 1.78
PRKCH-219ENST00000555906 TAF7Q15545 349 aaPredicted RBP26.19■■□□□ 1.78
PRKCH-219ENST00000555906 WDR90Q96KV7 1748 aa26.19■■□□□ 1.78
PRKCH-219ENST00000555906 RGL2O15211 777 aa26.18■■□□□ 1.78
PRKCH-219ENST00000555906 LMNB1P20700 586 aa26.18■■□□□ 1.78
PRKCH-219ENST00000555906 PIP4K2AP48426 406 aaPredicted RBP26.18■■□□□ 1.78
PRKCH-219ENST00000555906 CLEC4GQ6UXB4 293 aa26.18■■□□□ 1.78
PRKCH-219ENST00000555906 ZNF652Q9Y2D9 606 aa26.18■■□□□ 1.78
PRKCH-219ENST00000555906 ST5P78524 1137 aa26.17■■□□□ 1.78
PRKCH-219ENST00000555906 RBM46Q8TBY0 533 aaKnown RBP26.17■■□□□ 1.78
PRKCH-219ENST00000555906 PLEKHF1Q96S99 279 aa26.17■■□□□ 1.78
PRKCH-219ENST00000555906 SLX4Q8IY92 1834 aa26.16■■□□□ 1.78
PRKCH-219ENST00000555906 NFKBIEO00221 500 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms