RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
TRAPPC6B-205ENST00000555269 MAPK8IP3Q9UPT6 1336 aa16.43■□□□□ 0.22
TRAPPC6B-205ENST00000555269 RFC4P35249 363 aa16.42■□□□□ 0.22
TRAPPC6B-205ENST00000555269 RIPK4P57078 832 aa16.42■□□□□ 0.22
TRAPPC6B-205ENST00000555269 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
TRAPPC6B-205ENST00000555269 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
TRAPPC6B-205ENST00000555269 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
TRAPPC6B-205ENST00000555269 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
TRAPPC6B-205ENST00000555269 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
TRAPPC6B-205ENST00000555269 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
TRAPPC6B-205ENST00000555269 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
TRAPPC6B-205ENST00000555269 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
TRAPPC6B-205ENST00000555269 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
TRAPPC6B-205ENST00000555269 A1BGP04217 495 aa16.39■□□□□ 0.21
TRAPPC6B-205ENST00000555269 GYS1P13807 737 aa16.39■□□□□ 0.21
TRAPPC6B-205ENST00000555269 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
TRAPPC6B-205ENST00000555269 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
TRAPPC6B-205ENST00000555269 UBR3Q6ZT12 1888 aa16.38■□□□□ 0.21
TRAPPC6B-205ENST00000555269 STARD3NLO95772 234 aa16.38■□□□□ 0.21
TRAPPC6B-205ENST00000555269 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
TRAPPC6B-205ENST00000555269 ANP32CO43423 234 aa16.37■□□□□ 0.21
TRAPPC6B-205ENST00000555269 MMP10P09238 476 aa16.37■□□□□ 0.21
TRAPPC6B-205ENST00000555269 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
TRAPPC6B-205ENST00000555269 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC6B-205ENST00000555269 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
TRAPPC6B-205ENST00000555269 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC6B-205ENST00000555269 FKBP8Q14318 412 aa16.36■□□□□ 0.21
TRAPPC6B-205ENST00000555269 SOS1Q07889 1333 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC6B-205ENST00000555269 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
TRAPPC6B-205ENST00000555269 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
TRAPPC6B-205ENST00000555269 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
TRAPPC6B-205ENST00000555269 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
TRAPPC6B-205ENST00000555269 TJP1Q07157 1748 aa16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 ZPR1O75312 459 aa16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
TRAPPC6B-205ENST00000555269 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
TRAPPC6B-205ENST00000555269 APAF1O14727 1248 aa16.33■□□□□ 0.2
TRAPPC6B-205ENST00000555269 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NARFQ9UHQ1 456 aa16.33■□□□□ 0.2
TRAPPC6B-205ENST00000555269 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
TRAPPC6B-205ENST00000555269 SIPA1L3O60292 1781 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC6B-205ENST00000555269 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
TRAPPC6B-205ENST00000555269 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
TRAPPC6B-205ENST00000555269 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 TM4SF1P30408 202 aa16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
TRAPPC6B-205ENST00000555269 COL15A1P39059 1388 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 DDR1Q08345 913 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 GPR162Q16538 588 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
TRAPPC6B-205ENST00000555269 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
TRAPPC6B-205ENST00000555269 A0A087WZG4 1122 aa16.29■□□□□ 0.2
TRAPPC6B-205ENST00000555269 CHL1O00533 1208 aa16.28■□□□□ 0.2
TRAPPC6B-205ENST00000555269 POLA2Q14181 598 aa16.28■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NFIXQ14938 502 aa16.28■□□□□ 0.2
TRAPPC6B-205ENST00000555269 BICDL1Q6ZP65 573 aa16.28■□□□□ 0.2
TRAPPC6B-205ENST00000555269 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
TRAPPC6B-205ENST00000555269 UTRNP46939 3433 aa16.27■□□□□ 0.2
TRAPPC6B-205ENST00000555269 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
TRAPPC6B-205ENST00000555269 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC6B-205ENST00000555269 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
TRAPPC6B-205ENST00000555269 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC6B-205ENST00000555269 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
TRAPPC6B-205ENST00000555269 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
TRAPPC6B-205ENST00000555269 TBC1D9BQ66K14 1250 aa16.26■□□□□ 0.19
TRAPPC6B-205ENST00000555269 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
TRAPPC6B-205ENST00000555269 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
TRAPPC6B-205ENST00000555269 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
TRAPPC6B-205ENST00000555269 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
TRAPPC6B-205ENST00000555269 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
TRAPPC6B-205ENST00000555269 SERPINB2P05120 415 aa16.24■□□□□ 0.19
TRAPPC6B-205ENST00000555269 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
TRAPPC6B-205ENST00000555269 MYL6BP14649 208 aa16.23■□□□□ 0.19
TRAPPC6B-205ENST00000555269 DPEP1P16444 411 aa16.23■□□□□ 0.19
TRAPPC6B-205ENST00000555269 TGFB2P61812 414 aa16.22■□□□□ 0.19
TRAPPC6B-205ENST00000555269 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
TRAPPC6B-205ENST00000555269 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
TRAPPC6B-205ENST00000555269 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
TRAPPC6B-205ENST00000555269 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms