RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
MTHFD1-207ENST00000554677 ZBTB1Q9Y2K1 713 aa16.52■□□□□ 0.24
MTHFD1-207ENST00000554677 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
MTHFD1-207ENST00000554677 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
MTHFD1-207ENST00000554677 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
MTHFD1-207ENST00000554677 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
MTHFD1-207ENST00000554677 ZPR1O75312 459 aa16.5■□□□□ 0.23
MTHFD1-207ENST00000554677 CHRNA5P30532 468 aa16.5■□□□□ 0.23
MTHFD1-207ENST00000554677 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
MTHFD1-207ENST00000554677 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
MTHFD1-207ENST00000554677 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
MTHFD1-207ENST00000554677 NFIXQ14938 502 aa16.49■□□□□ 0.23
MTHFD1-207ENST00000554677 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
MTHFD1-207ENST00000554677 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
MTHFD1-207ENST00000554677 COL15A1P39059 1388 aa16.48■□□□□ 0.23
MTHFD1-207ENST00000554677 HSPA6P17066 643 aa16.47■□□□□ 0.23
MTHFD1-207ENST00000554677 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-207ENST00000554677 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-207ENST00000554677 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
MTHFD1-207ENST00000554677 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-207ENST00000554677 C9orf131Q5VYM1 1079 aa16.46■□□□□ 0.23
MTHFD1-207ENST00000554677 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
MTHFD1-207ENST00000554677 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
MTHFD1-207ENST00000554677 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.22
MTHFD1-207ENST00000554677 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
MTHFD1-207ENST00000554677 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
MTHFD1-207ENST00000554677 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 KCNQ3O43525 872 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 STARD3NLO95772 234 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 SERPINB2P05120 415 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 NMRK2Q9NPI5 230 aa16.44■□□□□ 0.22
MTHFD1-207ENST00000554677 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
MTHFD1-207ENST00000554677 TEFQ10587 303 aa16.43■□□□□ 0.22
MTHFD1-207ENST00000554677 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
MTHFD1-207ENST00000554677 TOMM70O94826 608 aa16.41■□□□□ 0.22
MTHFD1-207ENST00000554677 A1BGP04217 495 aa16.41■□□□□ 0.22
MTHFD1-207ENST00000554677 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
MTHFD1-207ENST00000554677 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
MTHFD1-207ENST00000554677 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
MTHFD1-207ENST00000554677 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
MTHFD1-207ENST00000554677 A0A087WZG4 1122 aa16.4■□□□□ 0.22
MTHFD1-207ENST00000554677 PRELPP51888 382 aa16.4■□□□□ 0.22
MTHFD1-207ENST00000554677 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
MTHFD1-207ENST00000554677 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
MTHFD1-207ENST00000554677 SCN7AQ01118 1682 aa16.38■□□□□ 0.21
MTHFD1-207ENST00000554677 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
MTHFD1-207ENST00000554677 RASSF7Q02833 373 aa16.38■□□□□ 0.21
MTHFD1-207ENST00000554677 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
MTHFD1-207ENST00000554677 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-207ENST00000554677 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 NUDCQ9Y266 331 aa16.37■□□□□ 0.21
MTHFD1-207ENST00000554677 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
MTHFD1-207ENST00000554677 MCM10Q7L590 875 aa16.36■□□□□ 0.21
MTHFD1-207ENST00000554677 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
MTHFD1-207ENST00000554677 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
MTHFD1-207ENST00000554677 H0YIN7 160 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 BCORQ6W2J9 1755 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
MTHFD1-207ENST00000554677 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
MTHFD1-207ENST00000554677 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
MTHFD1-207ENST00000554677 APLP1P51693 650 aa16.34■□□□□ 0.21
MTHFD1-207ENST00000554677 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
MTHFD1-207ENST00000554677 NFKBIEO00221 500 aa16.33■□□□□ 0.2
MTHFD1-207ENST00000554677 LMNB1P20700 586 aa16.33■□□□□ 0.2
MTHFD1-207ENST00000554677 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
MTHFD1-207ENST00000554677 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
MTHFD1-207ENST00000554677 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 PDE6BP35913 854 aa16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
MTHFD1-207ENST00000554677 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-207ENST00000554677 GLTPD2A6NH11 291 aa16.3■□□□□ 0.2
MTHFD1-207ENST00000554677 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
MTHFD1-207ENST00000554677 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms