RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
ABCD4-219ENST00000553745 TJP1Q07157 1748 aa17.89■□□□□ 0.45
ABCD4-219ENST00000553745 RGS12O14924 1447 aa17.89■□□□□ 0.45
ABCD4-219ENST00000553745 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
ABCD4-219ENST00000553745 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
ABCD4-219ENST00000553745 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
ABCD4-219ENST00000553745 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
ABCD4-219ENST00000553745 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
ABCD4-219ENST00000553745 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
ABCD4-219ENST00000553745 EP400Q96L91 3159 aa17.88■□□□□ 0.45
ABCD4-219ENST00000553745 G2E3Q7L622 706 aa17.87■□□□□ 0.45
ABCD4-219ENST00000553745 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
ABCD4-219ENST00000553745 KCNQ2O43526 872 aa17.86■□□□□ 0.45
ABCD4-219ENST00000553745 PDE4AP27815 886 aa17.86■□□□□ 0.45
ABCD4-219ENST00000553745 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
ABCD4-219ENST00000553745 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
ABCD4-219ENST00000553745 BACH2Q9BYV9 841 aa17.86■□□□□ 0.45
ABCD4-219ENST00000553745 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
ABCD4-219ENST00000553745 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
ABCD4-219ENST00000553745 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
ABCD4-219ENST00000553745 CICQ96RK0 1608 aaPredicted RBP17.85■□□□□ 0.45
ABCD4-219ENST00000553745 ANXA1P04083 346 aa17.85■□□□□ 0.45
ABCD4-219ENST00000553745 COG6Q9Y2V7 657 aa17.85■□□□□ 0.45
ABCD4-219ENST00000553745 PTPRCP08575 1304 aa17.85■□□□□ 0.45
ABCD4-219ENST00000553745 FLIIQ13045 1269 aa17.84■□□□□ 0.45
ABCD4-219ENST00000553745 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
ABCD4-219ENST00000553745 CHMP4AQ9BY43 222 aa17.84■□□□□ 0.45
ABCD4-219ENST00000553745 ABCC4O15439 1325 aa17.84■□□□□ 0.45
ABCD4-219ENST00000553745 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
ABCD4-219ENST00000553745 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
ABCD4-219ENST00000553745 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
ABCD4-219ENST00000553745 DBF4Q9UBU7 674 aaPredicted RBP17.84■□□□□ 0.45
ABCD4-219ENST00000553745 SKAP1Q86WV1 359 aa17.83■□□□□ 0.44
ABCD4-219ENST00000553745 MVPQ14764 893 aaKnown RBP17.82■□□□□ 0.44
ABCD4-219ENST00000553745 PDIA6Q15084 440 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 ZNF831Q5JPB2 1677 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
ABCD4-219ENST00000553745 RXRBP28702 533 aa17.81■□□□□ 0.44
ABCD4-219ENST00000553745 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
ABCD4-219ENST00000553745 VSIG10Q8N0Z9 540 aa17.81■□□□□ 0.44
ABCD4-219ENST00000553745 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
ABCD4-219ENST00000553745 LY75O60449 1722 aa17.81■□□□□ 0.44
ABCD4-219ENST00000553745 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
ABCD4-219ENST00000553745 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
ABCD4-219ENST00000553745 AAMPQ13685 434 aa17.81■□□□□ 0.44
ABCD4-219ENST00000553745 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
ABCD4-219ENST00000553745 ITPRIPQ8IWB1 547 aa17.8■□□□□ 0.44
ABCD4-219ENST00000553745 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
ABCD4-219ENST00000553745 PXDNLA1KZ92 1463 aa17.8■□□□□ 0.44
ABCD4-219ENST00000553745 MYL6BP14649 208 aa17.79■□□□□ 0.44
ABCD4-219ENST00000553745 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
ABCD4-219ENST00000553745 F6X3S4 739 aa17.79■□□□□ 0.44
ABCD4-219ENST00000553745 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
ABCD4-219ENST00000553745 RREB1Q92766 1687 aa17.78■□□□□ 0.44
ABCD4-219ENST00000553745 ANP32AP39687 249 aaKnown RBP17.78■□□□□ 0.44
ABCD4-219ENST00000553745 LRP10Q7Z4F1 713 aa17.78■□□□□ 0.44
ABCD4-219ENST00000553745 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
ABCD4-219ENST00000553745 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
ABCD4-219ENST00000553745 IGHDP01880 384 aa17.77■□□□□ 0.44
ABCD4-219ENST00000553745 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
ABCD4-219ENST00000553745 NUP188Q5SRE5 1749 aa17.77■□□□□ 0.44
ABCD4-219ENST00000553745 ADCY9O60503 1353 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 A1BGP04217 495 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 SIK1P57059 783 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 NBPF10Q6P3W6 841 aaKnown RBP17.76■□□□□ 0.43
ABCD4-219ENST00000553745 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-219ENST00000553745 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 FAM196AQ6ZSG2 479 aa17.76■□□□□ 0.43
ABCD4-219ENST00000553745 TAF1LQ8IZX4 1826 aa17.75■□□□□ 0.43
ABCD4-219ENST00000553745 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
ABCD4-219ENST00000553745 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
ABCD4-219ENST00000553745 SLC4A10Q6U841 1118 aa17.75■□□□□ 0.43
ABCD4-219ENST00000553745 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
ABCD4-219ENST00000553745 ATP6V1AP38606 617 aa17.74■□□□□ 0.43
ABCD4-219ENST00000553745 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
ABCD4-219ENST00000553745 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
ABCD4-219ENST00000553745 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
ABCD4-219ENST00000553745 STARD3NLO95772 234 aa17.74■□□□□ 0.43
ABCD4-219ENST00000553745 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
ABCD4-219ENST00000553745 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
ABCD4-219ENST00000553745 ITPK1Q13572 414 aa17.73■□□□□ 0.43
ABCD4-219ENST00000553745 COPS6Q7L5N1 327 aa17.73■□□□□ 0.43
ABCD4-219ENST00000553745 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
ABCD4-219ENST00000553745 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
ABCD4-219ENST00000553745 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
ABCD4-219ENST00000553745 ERICH6Q7L0X2 663 aa17.72■□□□□ 0.43
ABCD4-219ENST00000553745 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
ABCD4-219ENST00000553745 DNAAF4Q8WXU2 420 aa17.71■□□□□ 0.43
ABCD4-219ENST00000553745 ZBTB1Q9Y2K1 713 aa17.71■□□□□ 0.43
ABCD4-219ENST00000553745 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
ABCD4-219ENST00000553745 ATP10DQ9P241 1426 aa17.71■□□□□ 0.43
ABCD4-219ENST00000553745 TRIM37O94972 964 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 327.4 ms