RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 RNMTO43148 476 aaKnown RBP18.46■□□□□ 0.55
CNOT2-220ENST00000549750 PTCD1O75127 700 aaKnown RBP18.46■□□□□ 0.55
CNOT2-220ENST00000549750 MTHFSDQ2M296 383 aaKnown RBP18.46■□□□□ 0.55
CNOT2-220ENST00000549750 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
CNOT2-220ENST00000549750 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
CNOT2-220ENST00000549750 GYS1P13807 737 aa18.45■□□□□ 0.54
CNOT2-220ENST00000549750 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
CNOT2-220ENST00000549750 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
CNOT2-220ENST00000549750 RFC4P35249 363 aa18.44■□□□□ 0.54
CNOT2-220ENST00000549750 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
CNOT2-220ENST00000549750 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
CNOT2-220ENST00000549750 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
CNOT2-220ENST00000549750 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
CNOT2-220ENST00000549750 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
CNOT2-220ENST00000549750 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
CNOT2-220ENST00000549750 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
CNOT2-220ENST00000549750 CYP19A1P11511 503 aaPredicted RBP18.39■□□□□ 0.53
CNOT2-220ENST00000549750 VEGFAP15692 232 aaPredicted RBP18.39■□□□□ 0.53
CNOT2-220ENST00000549750 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
CNOT2-220ENST00000549750 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
CNOT2-220ENST00000549750 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
CNOT2-220ENST00000549750 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
CNOT2-220ENST00000549750 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
CNOT2-220ENST00000549750 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
CNOT2-220ENST00000549750 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
CNOT2-220ENST00000549750 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
CNOT2-220ENST00000549750 SLC34A2O95436 690 aa18.36■□□□□ 0.53
CNOT2-220ENST00000549750 CHRNA5P30532 468 aa18.36■□□□□ 0.53
CNOT2-220ENST00000549750 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
CNOT2-220ENST00000549750 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
CNOT2-220ENST00000549750 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
CNOT2-220ENST00000549750 GLTPD2A6NH11 291 aa18.35■□□□□ 0.53
CNOT2-220ENST00000549750 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
CNOT2-220ENST00000549750 FKBP8Q14318 412 aa18.35■□□□□ 0.53
CNOT2-220ENST00000549750 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
CNOT2-220ENST00000549750 DDR1Q08345 913 aa18.34■□□□□ 0.53
CNOT2-220ENST00000549750 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
CNOT2-220ENST00000549750 SBF1O95248 1867 aa18.34■□□□□ 0.53
CNOT2-220ENST00000549750 COL15A1P39059 1388 aa18.33■□□□□ 0.53
CNOT2-220ENST00000549750 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 LMNB1P20700 586 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 TM4SF1P30408 202 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 TEFQ10587 303 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
CNOT2-220ENST00000549750 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 NARFQ9UHQ1 456 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 ZBTB1Q9Y2K1 713 aa18.33■□□□□ 0.52
CNOT2-220ENST00000549750 ZPR1O75312 459 aa18.32■□□□□ 0.52
CNOT2-220ENST00000549750 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
CNOT2-220ENST00000549750 RASSF7Q02833 373 aa18.32■□□□□ 0.52
CNOT2-220ENST00000549750 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
CNOT2-220ENST00000549750 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
CNOT2-220ENST00000549750 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
CNOT2-220ENST00000549750 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
CNOT2-220ENST00000549750 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
CNOT2-220ENST00000549750 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
CNOT2-220ENST00000549750 STARD3NLO95772 234 aa18.3■□□□□ 0.52
CNOT2-220ENST00000549750 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
CNOT2-220ENST00000549750 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
CNOT2-220ENST00000549750 EIF5P55010 431 aaKnown RBP18.29■□□□□ 0.52
CNOT2-220ENST00000549750 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
CNOT2-220ENST00000549750 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
CNOT2-220ENST00000549750 CREBZFQ9NS37 354 aa18.28■□□□□ 0.52
CNOT2-220ENST00000549750 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
CNOT2-220ENST00000549750 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
CNOT2-220ENST00000549750 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
CNOT2-220ENST00000549750 NFIXQ14938 502 aa18.27■□□□□ 0.52
CNOT2-220ENST00000549750 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.52
CNOT2-220ENST00000549750 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
CNOT2-220ENST00000549750 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.52
CNOT2-220ENST00000549750 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
CNOT2-220ENST00000549750 A0A087WZG4 1122 aa18.26■□□□□ 0.51
CNOT2-220ENST00000549750 POTECB2RU33 542 aa18.26■□□□□ 0.51
CNOT2-220ENST00000549750 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
CNOT2-220ENST00000549750 FOXN1O15353 648 aa18.25■□□□□ 0.51
CNOT2-220ENST00000549750 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
CNOT2-220ENST00000549750 IL6STP40189 918 aaPredicted RBP18.25■□□□□ 0.51
CNOT2-220ENST00000549750 BTBD11A6QL63 1104 aa18.24■□□□□ 0.51
CNOT2-220ENST00000549750 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
CNOT2-220ENST00000549750 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
CNOT2-220ENST00000549750 SERPINB2P05120 415 aa18.22■□□□□ 0.51
CNOT2-220ENST00000549750 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
CNOT2-220ENST00000549750 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
CNOT2-220ENST00000549750 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
CNOT2-220ENST00000549750 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
CNOT2-220ENST00000549750 KCNQ3O43525 872 aa18.21■□□□□ 0.51
CNOT2-220ENST00000549750 DLG5Q8TDM6 1919 aa18.2■□□□□ 0.5
CNOT2-220ENST00000549750 NFKBIEO00221 500 aa18.2■□□□□ 0.5
CNOT2-220ENST00000549750 CNTNAP1P78357 1384 aa18.19■□□□□ 0.5
CNOT2-220ENST00000549750 H0YIN7 160 aa18.19■□□□□ 0.5
CNOT2-220ENST00000549750 MCM10Q7L590 875 aa18.19■□□□□ 0.5
CNOT2-220ENST00000549750 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
CNOT2-220ENST00000549750 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
CNOT2-220ENST00000549750 A1BGP04217 495 aa18.18■□□□□ 0.5
CNOT2-220ENST00000549750 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
CNOT2-220ENST00000549750 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
CNOT2-220ENST00000549750 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
CNOT2-220ENST00000549750 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
CNOT2-220ENST00000549750 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
CNOT2-220ENST00000549750 RGL2O15211 777 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms