RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 TRIM26Q12899 539 aaPredicted RBP28.65■■■□□ 2.18
SLC38A1-207ENST00000549633 SLC39A6Q13433 755 aa28.65■■■□□ 2.18
SLC38A1-207ENST00000549633 JMYQ8N9B5 988 aa28.65■■■□□ 2.18
SLC38A1-207ENST00000549633 PRELPP51888 382 aa28.64■■■□□ 2.18
SLC38A1-207ENST00000549633 TIMELESSQ9UNS1 1208 aa28.64■■■□□ 2.18
SLC38A1-207ENST00000549633 CCDC88AQ3V6T2 1871 aa28.63■■■□□ 2.17
SLC38A1-207ENST00000549633 NFIXQ14938 502 aa28.63■■■□□ 2.17
SLC38A1-207ENST00000549633 SLC52A2Q9HAB3 445 aa28.63■■■□□ 2.17
SLC38A1-207ENST00000549633 TIAM2Q8IVF5 1701 aa28.63■■■□□ 2.17
SLC38A1-207ENST00000549633 CYP19A1P11511 503 aaPredicted RBP28.62■■■□□ 2.17
SLC38A1-207ENST00000549633 AKAP4Q5JQC9 854 aa28.62■■■□□ 2.17
SLC38A1-207ENST00000549633 COL15A1P39059 1388 aa28.62■■■□□ 2.17
SLC38A1-207ENST00000549633 MRC1P22897 1456 aa28.61■■■□□ 2.17
SLC38A1-207ENST00000549633 ZBTB1Q9Y2K1 713 aa28.61■■■□□ 2.17
SLC38A1-207ENST00000549633 EIF4G2P78344 907 aaKnown RBP eCLIP28.6■■■□□ 2.171e-6■■■□□ 15
SLC38A1-207ENST00000549633 BCL2L12Q9HB09 334 aa28.6■■■□□ 2.17
SLC38A1-207ENST00000549633 SMC1BQ8NDV3 1235 aa28.59■■■□□ 2.17
SLC38A1-207ENST00000549633 NARFQ9UHQ1 456 aa28.59■■■□□ 2.17
SLC38A1-207ENST00000549633 CARMIL3Q8ND23 1372 aa28.59■■■□□ 2.17
SLC38A1-207ENST00000549633 RNMTO43148 476 aaKnown RBP28.58■■■□□ 2.17
SLC38A1-207ENST00000549633 CAPN15O75808 1086 aa28.58■■■□□ 2.17
SLC38A1-207ENST00000549633 SERPINB2P05120 415 aa28.57■■■□□ 2.16
SLC38A1-207ENST00000549633 HMOX1P09601 288 aa28.57■■■□□ 2.16
SLC38A1-207ENST00000549633 LMNB1P20700 586 aa28.55■■■□□ 2.16
SLC38A1-207ENST00000549633 UBR2Q8IWV8 1755 aa28.55■■■□□ 2.16
SLC38A1-207ENST00000549633 C2CD5Q86YS7 1000 aa28.54■■■□□ 2.16
SLC38A1-207ENST00000549633 ANKRD31Q8N7Z5 1873 aa28.53■■■□□ 2.16
SLC38A1-207ENST00000549633 GLTPD2A6NH11 291 aa28.53■■■□□ 2.16
SLC38A1-207ENST00000549633 CANXP27824 592 aaKnown RBP28.53■■■□□ 2.16
SLC38A1-207ENST00000549633 TTLL6Q8N841 843 aa28.53■■■□□ 2.16
SLC38A1-207ENST00000549633 KNSTRNQ9Y448 316 aa28.53■■■□□ 2.16
SLC38A1-207ENST00000549633 ZC3H4Q9UPT8 1303 aaKnown RBP28.52■■■□□ 2.16
SLC38A1-207ENST00000549633 NFKBIEO00221 500 aa28.52■■■□□ 2.16
SLC38A1-207ENST00000549633 BICDL1Q6ZP65 573 aa28.52■■■□□ 2.16
SLC38A1-207ENST00000549633 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
SLC38A1-207ENST00000549633 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
SLC38A1-207ENST00000549633 COL11A2P13942 1736 aaPredicted RBP28.5■■■□□ 2.15
SLC38A1-207ENST00000549633 VEGFAP15692 232 aaPredicted RBP28.5■■■□□ 2.15
SLC38A1-207ENST00000549633 PCNTO95613 3336 aa28.49■■■□□ 2.15
SLC38A1-207ENST00000549633 TNS4Q8IZW8 715 aa28.49■■■□□ 2.15
SLC38A1-207ENST00000549633 ZNF219Q9P2Y4 722 aaPredicted RBP28.48■■■□□ 2.15
SLC38A1-207ENST00000549633 H0YIN7 160 aa28.47■■■□□ 2.15
SLC38A1-207ENST00000549633 AMER1Q5JTC6 1135 aaPredicted RBP28.47■■■□□ 2.15
SLC38A1-207ENST00000549633 CCDC24Q8N4L8 307 aa28.47■■■□□ 2.15
SLC38A1-207ENST00000549633 SCN7AQ01118 1682 aa28.46■■■□□ 2.15
SLC38A1-207ENST00000549633 POTECB2RU33 542 aa28.46■■■□□ 2.15
SLC38A1-207ENST00000549633 VSIG10Q8N0Z9 540 aa28.45■■■□□ 2.14
SLC38A1-207ENST00000549633 CACNA1SQ13698 1873 aa28.44■■■□□ 2.14
SLC38A1-207ENST00000549633 HSPA1AP0DMV8 641 aaKnown RBP28.44■■■□□ 2.14
SLC38A1-207ENST00000549633 HSPA1BP0DMV9 641 aaKnown RBP28.44■■■□□ 2.14
SLC38A1-207ENST00000549633 TBC1D9BQ66K14 1250 aa28.44■■■□□ 2.14
SLC38A1-207ENST00000549633 ZNF622Q969S3 477 aaKnown RBP eCLIP28.44■■■□□ 2.144e-6■■□□□ 13.5
SLC38A1-207ENST00000549633 FER1L6Q2WGJ9 1857 aa28.44■■■□□ 2.14
SLC38A1-207ENST00000549633 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
SLC38A1-207ENST00000549633 DICER1Q9UPY3 1922 aaKnown RBP28.43■■■□□ 2.14
SLC38A1-207ENST00000549633 EIF5P55010 431 aaKnown RBP28.43■■■□□ 2.14
SLC38A1-207ENST00000549633 C21orf2O43822 256 aa28.42■■■□□ 2.14
SLC38A1-207ENST00000549633 ZNF330Q9Y3S2 320 aaPredicted RBP28.41■■■□□ 2.14
SLC38A1-207ENST00000549633 TTC5Q8N0Z6 440 aa28.4■■■□□ 2.14
SLC38A1-207ENST00000549633 TBC1D2BQ9UPU7 963 aa28.4■■■□□ 2.14
SLC38A1-207ENST00000549633 SIPA1L3O60292 1781 aaPredicted RBP28.39■■■□□ 2.14
SLC38A1-207ENST00000549633 PRR5LQ6MZQ0 368 aa28.39■■■□□ 2.14
SLC38A1-207ENST00000549633 ZNF496Q96IT1 587 aaPredicted RBP28.39■■■□□ 2.14
SLC38A1-207ENST00000549633 DIAPH1O60610 1272 aaKnown RBP28.38■■■□□ 2.13
SLC38A1-207ENST00000549633 STARD3NLO95772 234 aa28.38■■■□□ 2.13
SLC38A1-207ENST00000549633 A0A087WZG4 1122 aa28.37■■■□□ 2.13
SLC38A1-207ENST00000549633 ERFEQ4G0M1 354 aa28.37■■■□□ 2.13
SLC38A1-207ENST00000549633 DPY19L2Q6NUT2 758 aa28.37■■■□□ 2.13
SLC38A1-207ENST00000549633 SLX4Q8IY92 1834 aa28.36■■■□□ 2.13
SLC38A1-207ENST00000549633 BRIP1Q9BX63 1249 aa28.36■■■□□ 2.13
SLC38A1-207ENST00000549633 HEG1Q9ULI3 1381 aa28.36■■■□□ 2.13
SLC38A1-207ENST00000549633 POTEIP0CG38 1075 aa28.35■■■□□ 2.13
SLC38A1-207ENST00000549633 POTEJP0CG39 1038 aa28.35■■■□□ 2.13
SLC38A1-207ENST00000549633 CC2D1BQ5T0F9 858 aaKnown RBP28.35■■■□□ 2.13
SLC38A1-207ENST00000549633 PDE6BP35913 854 aa28.34■■■□□ 2.13
SLC38A1-207ENST00000549633 IL17REQ8NFR9 667 aa28.34■■■□□ 2.13
SLC38A1-207ENST00000549633 ZNF790Q6PG37 636 aa28.33■■■□□ 2.13
SLC38A1-207ENST00000549633 KIF7Q2M1P5 1343 aa28.33■■■□□ 2.13
SLC38A1-207ENST00000549633 BCORQ6W2J9 1755 aa28.32■■■□□ 2.12
SLC38A1-207ENST00000549633 A1BGP04217 495 aa28.32■■■□□ 2.12
SLC38A1-207ENST00000549633 TEFQ10587 303 aa28.32■■■□□ 2.12
SLC38A1-207ENST00000549633 COL3A1P02461 1466 aaPredicted RBP28.32■■■□□ 2.12
SLC38A1-207ENST00000549633 ARFGEF2Q9Y6D5 1785 aa28.32■■■□□ 2.12
SLC38A1-207ENST00000549633 DDNO94850 711 aaPredicted RBP28.31■■■□□ 2.12
SLC38A1-207ENST00000549633 CNGB1Q14028 1251 aaPredicted RBP28.31■■■□□ 2.12
SLC38A1-207ENST00000549633 MKRN1Q9UHC7 482 aaKnown RBP28.31■■■□□ 2.12
SLC38A1-207ENST00000549633 U2SURPO15042 1029 aaKnown RBP28.29■■■□□ 2.12
SLC38A1-207ENST00000549633 IL6STP40189 918 aaPredicted RBP28.29■■■□□ 2.12
SLC38A1-207ENST00000549633 CHADLQ6NUI6 762 aa28.29■■■□□ 2.12
SLC38A1-207ENST00000549633 TAOK3Q9H2K8 898 aa28.29■■■□□ 2.12
SLC38A1-207ENST00000549633 GNAT3A8MTJ3 354 aa28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 PER1O15534 1290 aaPredicted RBP28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 KCNQ3O43525 872 aa28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 CAMTA2O94983 1202 aa28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 CNBD1Q8NA66 436 aa28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 PDZRN3Q9UPQ7 1066 aa28.28■■■□□ 2.12
SLC38A1-207ENST00000549633 LTBP3Q9NS15 1303 aa28.27■■■□□ 2.12
SLC38A1-207ENST00000549633 PRPF40BQ6NWY9 871 aaKnown RBP28.27■■■□□ 2.12
SLC38A1-207ENST00000549633 SETDB2Q96T68 719 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms