RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
GCN1-204ENST00000548132 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
GCN1-204ENST00000548132 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
GCN1-204ENST00000548132 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
GCN1-204ENST00000548132 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
GCN1-204ENST00000548132 RFC4P35249 363 aa16.74■□□□□ 0.27
GCN1-204ENST00000548132 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
GCN1-204ENST00000548132 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
GCN1-204ENST00000548132 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
GCN1-204ENST00000548132 VSIG10Q8N0Z9 540 aa16.73■□□□□ 0.27
GCN1-204ENST00000548132 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
GCN1-204ENST00000548132 KCNQ3O43525 872 aa16.72■□□□□ 0.27
GCN1-204ENST00000548132 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
GCN1-204ENST00000548132 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
GCN1-204ENST00000548132 KCNA3P22001 575 aa16.71■□□□□ 0.27
GCN1-204ENST00000548132 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
GCN1-204ENST00000548132 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
GCN1-204ENST00000548132 DPEP1P16444 411 aa16.7■□□□□ 0.26
GCN1-204ENST00000548132 TM4SF1P30408 202 aa16.7■□□□□ 0.26
GCN1-204ENST00000548132 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
GCN1-204ENST00000548132 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
GCN1-204ENST00000548132 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
GCN1-204ENST00000548132 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
GCN1-204ENST00000548132 TEFQ10587 303 aa16.69■□□□□ 0.26
GCN1-204ENST00000548132 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
GCN1-204ENST00000548132 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
GCN1-204ENST00000548132 TGFB2P61812 414 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 NFIXQ14938 502 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 MCM10Q7L590 875 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
GCN1-204ENST00000548132 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
GCN1-204ENST00000548132 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
GCN1-204ENST00000548132 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
GCN1-204ENST00000548132 NUP98P52948 1817 aa16.67■□□□□ 0.26
GCN1-204ENST00000548132 FCHSD2O94868 740 aa16.66■□□□□ 0.26
GCN1-204ENST00000548132 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
GCN1-204ENST00000548132 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
GCN1-204ENST00000548132 ANKRD36CQ5JPF3 1778 aa16.65■□□□□ 0.26
GCN1-204ENST00000548132 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
GCN1-204ENST00000548132 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
GCN1-204ENST00000548132 CHRNA5P30532 468 aa16.64■□□□□ 0.25
GCN1-204ENST00000548132 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
GCN1-204ENST00000548132 C1QTNF8P60827 252 aa16.63■□□□□ 0.25
GCN1-204ENST00000548132 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
GCN1-204ENST00000548132 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
GCN1-204ENST00000548132 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
GCN1-204ENST00000548132 ZPR1O75312 459 aa16.62■□□□□ 0.25
GCN1-204ENST00000548132 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
GCN1-204ENST00000548132 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
GCN1-204ENST00000548132 A1BGP04217 495 aa16.62■□□□□ 0.25
GCN1-204ENST00000548132 PIP4K2AP48426 406 aaPredicted RBP16.62■□□□□ 0.25
GCN1-204ENST00000548132 STARD3NLO95772 234 aa16.61■□□□□ 0.25
GCN1-204ENST00000548132 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
GCN1-204ENST00000548132 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
GCN1-204ENST00000548132 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
GCN1-204ENST00000548132 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
GCN1-204ENST00000548132 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
GCN1-204ENST00000548132 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
GCN1-204ENST00000548132 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
GCN1-204ENST00000548132 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
GCN1-204ENST00000548132 LAMB2P55268 1798 aa16.59■□□□□ 0.25
GCN1-204ENST00000548132 SERPINB2P05120 415 aa16.58■□□□□ 0.24
GCN1-204ENST00000548132 PRELPP51888 382 aa16.58■□□□□ 0.24
GCN1-204ENST00000548132 NFE2L2Q16236 605 aa16.58■□□□□ 0.24
GCN1-204ENST00000548132 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
GCN1-204ENST00000548132 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
GCN1-204ENST00000548132 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
GCN1-204ENST00000548132 ZNF526Q8TF50 670 aaPredicted RBP16.57■□□□□ 0.24
GCN1-204ENST00000548132 A0A087WZG4 1122 aa16.56■□□□□ 0.24
GCN1-204ENST00000548132 KIF3CO14782 793 aa16.56■□□□□ 0.24
GCN1-204ENST00000548132 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
GCN1-204ENST00000548132 PIM2Q9P1W9 311 aa16.56■□□□□ 0.24
GCN1-204ENST00000548132 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
GCN1-204ENST00000548132 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
GCN1-204ENST00000548132 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
GCN1-204ENST00000548132 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
GCN1-204ENST00000548132 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
GCN1-204ENST00000548132 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
GCN1-204ENST00000548132 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
GCN1-204ENST00000548132 RASSF7Q02833 373 aa16.54■□□□□ 0.24
GCN1-204ENST00000548132 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
GCN1-204ENST00000548132 RALBP1Q15311 655 aa16.54■□□□□ 0.24
GCN1-204ENST00000548132 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
GCN1-204ENST00000548132 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
GCN1-204ENST00000548132 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
GCN1-204ENST00000548132 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
GCN1-204ENST00000548132 ARHGAP27Q6ZUM4 889 aa16.53■□□□□ 0.24
GCN1-204ENST00000548132 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
GCN1-204ENST00000548132 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
GCN1-204ENST00000548132 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
GCN1-204ENST00000548132 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.24
GCN1-204ENST00000548132 C9orf131Q5VYM1 1079 aa16.52■□□□□ 0.24
GCN1-204ENST00000548132 NFKBIEO00221 500 aa16.51■□□□□ 0.23
GCN1-204ENST00000548132 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
GCN1-204ENST00000548132 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
GCN1-204ENST00000548132 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
GCN1-204ENST00000548132 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
GCN1-204ENST00000548132 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms