RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 TRAPPC3LQ5T215 181 aa14.41□□□□□ -0.1
GCN1-202ENST00000547263 ZBTB1Q9Y2K1 713 aa14.41□□□□□ -0.1
GCN1-202ENST00000547263 BCORQ6W2J9 1755 aa14.41□□□□□ -0.1
GCN1-202ENST00000547263 NRXN2Q9P2S2 1712 aa14.41□□□□□ -0.1
GCN1-202ENST00000547263 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
GCN1-202ENST00000547263 GYS1P13807 737 aa14.4□□□□□ -0.1
GCN1-202ENST00000547263 EIF4A1P60842 406 aaKnown RBP14.4□□□□□ -0.1
GCN1-202ENST00000547263 ARXQ96QS3 562 aa14.4□□□□□ -0.1
GCN1-202ENST00000547263 USP16Q9Y5T5 823 aa14.4□□□□□ -0.1
GCN1-202ENST00000547263 KIAA1551Q9HCM1 1747 aa14.4□□□□□ -0.1
GCN1-202ENST00000547263 COL15A1P39059 1388 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 CHL1O00533 1208 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 PHF14O94880 888 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 STARD3NLO95772 234 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 SNRPA1P09661 255 aaKnown RBP14.39□□□□□ -0.11
GCN1-202ENST00000547263 CCDC27Q2M243 656 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
GCN1-202ENST00000547263 RRP7AQ9Y3A4 280 aaKnown RBP14.39□□□□□ -0.11
GCN1-202ENST00000547263 PRAMEF22A3QJZ6 481 aa14.38□□□□□ -0.11
GCN1-202ENST00000547263 APAF1O14727 1248 aa14.38□□□□□ -0.11
GCN1-202ENST00000547263 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
GCN1-202ENST00000547263 ZNF853P0CG23 659 aa14.38□□□□□ -0.11
GCN1-202ENST00000547263 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
GCN1-202ENST00000547263 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
GCN1-202ENST00000547263 POLD1P28340 1107 aa14.37□□□□□ -0.11
GCN1-202ENST00000547263 NLGN1Q8N2Q7 840 aa14.37□□□□□ -0.11
GCN1-202ENST00000547263 SYT17Q9BSW7 474 aa14.37□□□□□ -0.11
GCN1-202ENST00000547263 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
GCN1-202ENST00000547263 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
GCN1-202ENST00000547263 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
GCN1-202ENST00000547263 RGL2O15211 777 aa14.36□□□□□ -0.11
GCN1-202ENST00000547263 RFC4P35249 363 aa14.36□□□□□ -0.11
GCN1-202ENST00000547263 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
GCN1-202ENST00000547263 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 MSH5O43196 834 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 A1BGP04217 495 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 TM4SF1P30408 202 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
GCN1-202ENST00000547263 NBPF15Q8N660 670 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
GCN1-202ENST00000547263 PPP1R1BQ9UD71 204 aaPredicted RBP14.35□□□□□ -0.11
GCN1-202ENST00000547263 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
GCN1-202ENST00000547263 C10orf71Q711Q0 1435 aa14.34□□□□□ -0.11
GCN1-202ENST00000547263 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
GCN1-202ENST00000547263 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
GCN1-202ENST00000547263 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
GCN1-202ENST00000547263 ERBB4Q15303 1308 aa14.34□□□□□ -0.11
GCN1-202ENST00000547263 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.11
GCN1-202ENST00000547263 A0A087WZG4 1122 aa14.33□□□□□ -0.12
GCN1-202ENST00000547263 FKBP8Q14318 412 aa14.33□□□□□ -0.12
GCN1-202ENST00000547263 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
GCN1-202ENST00000547263 CD2APQ9Y5K6 639 aa14.33□□□□□ -0.12
GCN1-202ENST00000547263 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
GCN1-202ENST00000547263 MMP10P09238 476 aa14.32□□□□□ -0.12
GCN1-202ENST00000547263 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
GCN1-202ENST00000547263 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
GCN1-202ENST00000547263 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
GCN1-202ENST00000547263 CAMTA2O94983 1202 aa14.31□□□□□ -0.12
GCN1-202ENST00000547263 HOXB7P09629 217 aa14.31□□□□□ -0.12
GCN1-202ENST00000547263 DDR1Q08345 913 aa14.31□□□□□ -0.12
GCN1-202ENST00000547263 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
GCN1-202ENST00000547263 IL16Q14005 1332 aa14.31□□□□□ -0.12
GCN1-202ENST00000547263 POLRMTO00411 1230 aaKnown RBP14.3□□□□□ -0.12
GCN1-202ENST00000547263 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
GCN1-202ENST00000547263 PDIA6Q15084 440 aa14.3□□□□□ -0.12
GCN1-202ENST00000547263 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
GCN1-202ENST00000547263 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
GCN1-202ENST00000547263 NUP98P52948 1817 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 ZPR1O75312 459 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 NFIXQ14938 502 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 NLGN2Q8NFZ4 835 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 DLEC1Q9Y238 1755 aa14.29□□□□□ -0.12
GCN1-202ENST00000547263 GNAI1P63096 354 aa14.28□□□□□ -0.12
GCN1-202ENST00000547263 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
GCN1-202ENST00000547263 ZNF521Q96K83 1311 aa14.28□□□□□ -0.12
GCN1-202ENST00000547263 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
GCN1-202ENST00000547263 KRT24Q2M2I5 525 aa14.27□□□□□ -0.13
GCN1-202ENST00000547263 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
GCN1-202ENST00000547263 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
GCN1-202ENST00000547263 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.13
GCN1-202ENST00000547263 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
GCN1-202ENST00000547263 PARP3Q9Y6F1 533 aa14.26□□□□□ -0.13
GCN1-202ENST00000547263 ANKRD36CQ5JPF3 1778 aa14.26□□□□□ -0.13
GCN1-202ENST00000547263 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
GCN1-202ENST00000547263 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
GCN1-202ENST00000547263 TGFB2P61812 414 aa14.25□□□□□ -0.13
GCN1-202ENST00000547263 TBC1D9BQ66K14 1250 aa14.25□□□□□ -0.13
GCN1-202ENST00000547263 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
GCN1-202ENST00000547263 ARFGEF1Q9Y6D6 1849 aa14.24□□□□□ -0.13
GCN1-202ENST00000547263 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 MAP3K15Q6ZN16 1313 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 SERPINB2P05120 415 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 KCNA3P22001 575 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 CHD4Q14839 1912 aa14.23□□□□□ -0.13
GCN1-202ENST00000547263 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms