RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TRPV5Q9NQA5 729 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 PCDHGA4Q9Y5G9 962 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 U2SURPO15042 1029 aaKnown RBP6.08□□□□□ -1.44
UBE4A-203ENST00000545354 CAND2O75155 1236 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 ERLIN1O75477 346 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 FLIIQ13045 1269 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 COL19A1Q14993 1142 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 SYCP1Q15431 976 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 PCGF5Q86SE9 256 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 LMNTD2Q8IXW0 634 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 RETREG2Q8NC44 543 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 TRIM7Q9C029 511 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 GRPEL1Q9HAV7 217 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 IKBKGQ9Y6K9 419 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 IBTKQ9P2D0 1353 aaPredicted RBP6.08□□□□□ -1.44
UBE4A-203ENST00000545354 RBM47A0AV96 593 aaKnown RBP6.08□□□□□ -1.44
UBE4A-203ENST00000545354 ERICH4A6NGS2 130 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 FRAT2O75474 233 aaPredicted RBP6.08□□□□□ -1.44
UBE4A-203ENST00000545354 REC8O95072 547 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 TPM1P09493 284 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 PRPHP41219 470 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 SFSWAPQ12872 951 aaKnown RBP6.08□□□□□ -1.44
UBE4A-203ENST00000545354 TERF2Q15554 542 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 MCTP2Q6DN12 878 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 MORC1Q86VD1 984 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 DRC7Q8IY82 874 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 MIPOL1Q8TD10 442 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 PMM1Q92871 262 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC34Q96HJ3 373 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 BACH2Q9BYV9 841 aa6.08□□□□□ -1.44
UBE4A-203ENST00000545354 SLFN14P0C7P3 912 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 STIP1P31948 543 aaKnown RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 SH3BGRP55822 239 aaPredicted RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 PPP4CP60510 307 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 MIGA1Q8NAN2 632 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 STAG1Q8WVM7 1258 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 UIMC1Q96RL1 719 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 PAGR1Q9BTK6 254 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 SPATS2LQ9NUQ6 558 aaKnown RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 TMOD4Q9NZQ9 345 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 NOL7Q9UMY1 257 aaKnown RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 PABPN1LA6NDY0 278 aaKnown RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 MAN1A1P33908 653 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 KRT72Q14CN4 511 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC174Q6PII3 467 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 TXLNBQ8N3L3 684 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 NBPF15Q8N660 670 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 TATDN2Q93075 761 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 NAP1L4Q99733 375 aaKnown RBP6.07□□□□□ -1.44
UBE4A-203ENST00000545354 UNC45AQ9H3U1 944 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 INCENPQ9NQS7 918 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 SERPINA10Q9UK55 444 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 ZNF232Q9UNY5 417 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 SCINQ9Y6U3 715 aa6.07□□□□□ -1.44
UBE4A-203ENST00000545354 ST18O60284 1047 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 TRIM37O94972 964 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 RPL17P18621 184 aaKnown RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 PDE4AP27815 886 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 RBM5P52756 815 aaKnown RBP eCLIP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 IRF5Q13568 498 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 PDIA5Q14554 519 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 ZNF394Q53GI3 561 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 DNAJC21Q5F1R6 531 aaKnown RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 LARP1BQ659C4 914 aaKnown RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 DRAXINQ8NBI3 349 aaPredicted RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 ZBTB9Q96C00 473 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 MPP4Q96JB8 637 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 MAK16Q9BXY0 300 aaKnown RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 SEZ6LQ9BYH1 1024 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 INO80BQ9C086 356 aaPredicted RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 RYDENQ9NUL5 291 aaKnown RBP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 NRBP1Q9UHY1 535 aa6.06□□□□□ -1.44
UBE4A-203ENST00000545354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.06□□□□□ -1.44
UBE4A-203ENST00000545354 HARSP12081 509 aaKnown RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 DBN1Q16643 649 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 SKOR2Q2VWA4 1001 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TTC31Q49AM3 519 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC178Q5BJE1 867 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 LEKR1Q6ZMV7 388 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 ANKRD13DQ6ZTN6 518 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 NCAPG2Q86XI2 1143 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 FNBP4Q8N3X1 1017 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC26Q8TAB7 109 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 DNAAF4Q8WXU2 420 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CDC5LQ99459 802 aaKnown RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 BLOC1S6Q9UL45 172 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 MORC2Q9Y6X9 1032 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 C21orf2O43822 256 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 GTPBP6O43824 516 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TRAK2O60296 914 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 E2F6O75461 281 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 OATP04181 439 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TNNT1P13805 278 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 RAD51AP2Q09MP3 1159 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms