RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 NHSQ6T4R5 1651 aa17.52■□□□□ 0.39
SCARB1-209ENST00000545305 RLBP1P12271 317 aa17.51■□□□□ 0.39
SCARB1-209ENST00000545305 FLIIQ13045 1269 aa17.51■□□□□ 0.39
SCARB1-209ENST00000545305 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
SCARB1-209ENST00000545305 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
SCARB1-209ENST00000545305 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-209ENST00000545305 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
SCARB1-209ENST00000545305 ABCC4O15439 1325 aa17.5■□□□□ 0.39
SCARB1-209ENST00000545305 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
SCARB1-209ENST00000545305 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-209ENST00000545305 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
SCARB1-209ENST00000545305 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-209ENST00000545305 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCARB1-209ENST00000545305 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
SCARB1-209ENST00000545305 RXRBP28702 533 aa17.49■□□□□ 0.39
SCARB1-209ENST00000545305 G2E3Q7L622 706 aa17.49■□□□□ 0.39
SCARB1-209ENST00000545305 KRT27Q7Z3Y8 459 aa17.49■□□□□ 0.39
SCARB1-209ENST00000545305 AAMPQ13685 434 aa17.48■□□□□ 0.39
SCARB1-209ENST00000545305 TMEM57Q8N5G2 664 aa17.48■□□□□ 0.39
SCARB1-209ENST00000545305 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
SCARB1-209ENST00000545305 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
SCARB1-209ENST00000545305 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
SCARB1-209ENST00000545305 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
SCARB1-209ENST00000545305 RGS12O14924 1447 aa17.47■□□□□ 0.39
SCARB1-209ENST00000545305 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
SCARB1-209ENST00000545305 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
SCARB1-209ENST00000545305 KCNQ2O43526 872 aa17.46■□□□□ 0.39
SCARB1-209ENST00000545305 STARD3NLO95772 234 aa17.46■□□□□ 0.39
SCARB1-209ENST00000545305 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
SCARB1-209ENST00000545305 ANXA1P04083 346 aa17.46■□□□□ 0.39
SCARB1-209ENST00000545305 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
SCARB1-209ENST00000545305 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
SCARB1-209ENST00000545305 BTAF1O14981 1849 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 MYL6BP14649 208 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
SCARB1-209ENST00000545305 TJP1Q07157 1748 aa17.44■□□□□ 0.38
SCARB1-209ENST00000545305 CICQ96RK0 1608 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-209ENST00000545305 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
SCARB1-209ENST00000545305 PDIA6Q15084 440 aa17.44■□□□□ 0.38
SCARB1-209ENST00000545305 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
SCARB1-209ENST00000545305 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
SCARB1-209ENST00000545305 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-209ENST00000545305 LOC102724428A0A0B4J2F2 783 aa17.43■□□□□ 0.38
SCARB1-209ENST00000545305 SIK1P57059 783 aa17.43■□□□□ 0.38
SCARB1-209ENST00000545305 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
SCARB1-209ENST00000545305 F6X3S4 739 aa17.42■□□□□ 0.38
SCARB1-209ENST00000545305 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
SCARB1-209ENST00000545305 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
SCARB1-209ENST00000545305 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
SCARB1-209ENST00000545305 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
SCARB1-209ENST00000545305 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
SCARB1-209ENST00000545305 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-209ENST00000545305 RGS17Q9UGC6 210 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-209ENST00000545305 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 A1BGP04217 495 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 ADCY9O60503 1353 aa17.4■□□□□ 0.38
SCARB1-209ENST00000545305 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
SCARB1-209ENST00000545305 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-209ENST00000545305 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-209ENST00000545305 NBPF14Q5TI25 921 aa17.39■□□□□ 0.37
SCARB1-209ENST00000545305 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
SCARB1-209ENST00000545305 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
SCARB1-209ENST00000545305 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
SCARB1-209ENST00000545305 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
SCARB1-209ENST00000545305 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
SCARB1-209ENST00000545305 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
SCARB1-209ENST00000545305 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
SCARB1-209ENST00000545305 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
SCARB1-209ENST00000545305 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
SCARB1-209ENST00000545305 SRCIN1Q9C0H9 1055 aa17.37■□□□□ 0.37
SCARB1-209ENST00000545305 ZBTB40Q9NUA8 1239 aa17.37■□□□□ 0.37
SCARB1-209ENST00000545305 ZNF330Q9Y3S2 320 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-209ENST00000545305 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-209ENST00000545305 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-209ENST00000545305 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
SCARB1-209ENST00000545305 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
SCARB1-209ENST00000545305 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
SCARB1-209ENST00000545305 RREB1Q92766 1687 aa17.36■□□□□ 0.37
SCARB1-209ENST00000545305 LY75O60449 1722 aa17.35■□□□□ 0.37
SCARB1-209ENST00000545305 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
SCARB1-209ENST00000545305 ITPK1Q13572 414 aa17.35■□□□□ 0.37
SCARB1-209ENST00000545305 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
SCARB1-209ENST00000545305 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
SCARB1-209ENST00000545305 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-209ENST00000545305 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
SCARB1-209ENST00000545305 TRIM37O94972 964 aa17.34■□□□□ 0.37
SCARB1-209ENST00000545305 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
SCARB1-209ENST00000545305 BEND3Q5T5X7 828 aa17.34■□□□□ 0.37
SCARB1-209ENST00000545305 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
SCARB1-209ENST00000545305 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
SCARB1-209ENST00000545305 GNAI3P08754 354 aa17.33■□□□□ 0.36
SCARB1-209ENST00000545305 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms