RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
PDCD2-213ENST00000544866 MIER1Q8N108 512 aa22.04■■□□□ 1.12
PDCD2-213ENST00000544866 TEX13AQ9BXU3 409 aaPredicted RBP22.04■■□□□ 1.12
PDCD2-213ENST00000544866 SPON1Q9HCB6 807 aa22.04■■□□□ 1.12
PDCD2-213ENST00000544866 CHL1O00533 1208 aa22.03■■□□□ 1.12
PDCD2-213ENST00000544866 STARD3NLO95772 234 aa22.03■■□□□ 1.12
PDCD2-213ENST00000544866 SNRPA1P09661 255 aaKnown RBP22.03■■□□□ 1.12
PDCD2-213ENST00000544866 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
PDCD2-213ENST00000544866 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
PDCD2-213ENST00000544866 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
PDCD2-213ENST00000544866 ZBTB1Q9Y2K1 713 aa22.03■■□□□ 1.12
PDCD2-213ENST00000544866 MSH5O43196 834 aa22.02■■□□□ 1.12
PDCD2-213ENST00000544866 ADRA2BP18089 450 aa22.02■■□□□ 1.12
PDCD2-213ENST00000544866 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.12
PDCD2-213ENST00000544866 PTGER2P43116 358 aa22.01■■□□□ 1.11
PDCD2-213ENST00000544866 SGIP1Q9BQI5 828 aa22.01■■□□□ 1.11
PDCD2-213ENST00000544866 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
PDCD2-213ENST00000544866 ZNF853P0CG23 659 aa22■■□□□ 1.11
PDCD2-213ENST00000544866 TRAPPC3LQ5T215 181 aa22■■□□□ 1.11
PDCD2-213ENST00000544866 ARHGEF1Q92888 912 aaKnown RBP22■■□□□ 1.11
PDCD2-213ENST00000544866 CFAP44Q96MT7 982 aa22■■□□□ 1.11
PDCD2-213ENST00000544866 USP16Q9Y5T5 823 aa22■■□□□ 1.11
PDCD2-213ENST00000544866 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
PDCD2-213ENST00000544866 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
PDCD2-213ENST00000544866 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
PDCD2-213ENST00000544866 IFT57Q9NWB7 429 aa21.98■■□□□ 1.11
PDCD2-213ENST00000544866 COL15A1P39059 1388 aa21.98■■□□□ 1.11
PDCD2-213ENST00000544866 A1BGP04217 495 aa21.97■■□□□ 1.11
PDCD2-213ENST00000544866 CANXP27824 592 aaKnown RBP21.96■■□□□ 1.11
PDCD2-213ENST00000544866 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
PDCD2-213ENST00000544866 MSL1Q68DK7 614 aa21.96■■□□□ 1.11
PDCD2-213ENST00000544866 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
PDCD2-213ENST00000544866 RFC4P35249 363 aa21.95■■□□□ 1.1
PDCD2-213ENST00000544866 GNAI1P63096 354 aa21.95■■□□□ 1.1
PDCD2-213ENST00000544866 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
PDCD2-213ENST00000544866 SCN7AQ01118 1682 aa21.95■■□□□ 1.1
PDCD2-213ENST00000544866 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
PDCD2-213ENST00000544866 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
PDCD2-213ENST00000544866 BCORQ6W2J9 1755 aa21.94■■□□□ 1.1
PDCD2-213ENST00000544866 PIP4K2AP48426 406 aaPredicted RBP21.93■■□□□ 1.1
PDCD2-213ENST00000544866 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
PDCD2-213ENST00000544866 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
PDCD2-213ENST00000544866 IL16Q14005 1332 aa21.92■■□□□ 1.1
PDCD2-213ENST00000544866 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
PDCD2-213ENST00000544866 GYS1P13807 737 aa21.92■■□□□ 1.1
PDCD2-213ENST00000544866 NBPF10Q6P3W6 841 aaKnown RBP21.92■■□□□ 1.1
PDCD2-213ENST00000544866 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
PDCD2-213ENST00000544866 NBPF15Q8N660 670 aa21.92■■□□□ 1.1
PDCD2-213ENST00000544866 POLD1P28340 1107 aa21.91■■□□□ 1.1
PDCD2-213ENST00000544866 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
PDCD2-213ENST00000544866 ZNF521Q96K83 1311 aa21.89■■□□□ 1.1
PDCD2-213ENST00000544866 A0A087WZG4 1122 aa21.89■■□□□ 1.09
PDCD2-213ENST00000544866 WDR63Q8IWG1 891 aa21.89■■□□□ 1.09
PDCD2-213ENST00000544866 ARXQ96QS3 562 aa21.89■■□□□ 1.09
PDCD2-213ENST00000544866 PPP1R1BQ9UD71 204 aaPredicted RBP21.89■■□□□ 1.09
PDCD2-213ENST00000544866 USPL1Q5W0Q7 1092 aa21.88■■□□□ 1.09
PDCD2-213ENST00000544866 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
PDCD2-213ENST00000544866 ZNF330Q9Y3S2 320 aaPredicted RBP21.88■■□□□ 1.09
PDCD2-213ENST00000544866 ERBB4Q15303 1308 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 ZPR1O75312 459 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 HOXB7P09629 217 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 FKBP8Q14318 412 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 NLGN1Q8N2Q7 840 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 BCL2L12Q9HB09 334 aa21.87■■□□□ 1.09
PDCD2-213ENST00000544866 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
PDCD2-213ENST00000544866 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
PDCD2-213ENST00000544866 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
PDCD2-213ENST00000544866 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
PDCD2-213ENST00000544866 PDIA6Q15084 440 aa21.85■■□□□ 1.09
PDCD2-213ENST00000544866 C8orf58Q8NAV2 365 aa21.85■■□□□ 1.09
PDCD2-213ENST00000544866 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
PDCD2-213ENST00000544866 CAMTA2O94983 1202 aa21.84■■□□□ 1.09
PDCD2-213ENST00000544866 MMP10P09238 476 aa21.84■■□□□ 1.09
PDCD2-213ENST00000544866 LRP10Q7Z4F1 713 aa21.84■■□□□ 1.09
PDCD2-213ENST00000544866 NUP98P52948 1817 aa21.84■■□□□ 1.09
PDCD2-213ENST00000544866 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
PDCD2-213ENST00000544866 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.09
PDCD2-213ENST00000544866 PROSER3Q2NL68 480 aa21.83■■□□□ 1.09
PDCD2-213ENST00000544866 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
PDCD2-213ENST00000544866 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.09
PDCD2-213ENST00000544866 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
PDCD2-213ENST00000544866 FHDC1Q9C0D6 1143 aaPredicted RBP21.83■■□□□ 1.09
PDCD2-213ENST00000544866 NRXN2Q9P2S2 1712 aa21.82■■□□□ 1.08
PDCD2-213ENST00000544866 ANXA1P04083 346 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 MYL6BP14649 208 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 TM4SF1P30408 202 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 DDR1Q08345 913 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 HDGFL1Q5TGJ6 251 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
PDCD2-213ENST00000544866 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
PDCD2-213ENST00000544866 NFIXQ14938 502 aa21.79■■□□□ 1.08
PDCD2-213ENST00000544866 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
PDCD2-213ENST00000544866 SYT17Q9BSW7 474 aa21.79■■□□□ 1.08
PDCD2-213ENST00000544866 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDCD2-213ENST00000544866 CHPF2Q9P2E5 772 aa21.79■■□□□ 1.08
PDCD2-213ENST00000544866 GOLGB1Q14789 3259 aaKnown RBP21.79■■□□□ 1.08
PDCD2-213ENST00000544866 KIAA1551Q9HCM1 1747 aa21.78■■□□□ 1.08
PDCD2-213ENST00000544866 POLRMTO00411 1230 aaKnown RBP21.78■■□□□ 1.08
PDCD2-213ENST00000544866 RGL2O15211 777 aa21.77■■□□□ 1.08
PDCD2-213ENST00000544866 TBC1D9BQ66K14 1250 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms