RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
DDX55-212ENST00000544738 IL13P35225 146 aa21.95■■□□□ 1.1
DDX55-212ENST00000544738 USPL1Q5W0Q7 1092 aa21.95■■□□□ 1.1
DDX55-212ENST00000544738 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.1
DDX55-212ENST00000544738 POTECB2RU33 542 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 MTHFSP49914 203 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 SULT6B1Q6IMI4 303 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 NFATC2IPQ8NCF5 419 aa21.94■■□□□ 1.1
DDX55-212ENST00000544738 C1orf141Q5JVX7 400 aa21.93■■□□□ 1.1
DDX55-212ENST00000544738 AEBP1Q8IUX7 1158 aa21.93■■□□□ 1.1
DDX55-212ENST00000544738 KDM6AO15550 1401 aaPredicted RBP21.92■■□□□ 1.1
DDX55-212ENST00000544738 NPC1L1Q9UHC9 1359 aa21.92■■□□□ 1.1
DDX55-212ENST00000544738 FOXN1O15353 648 aa21.92■■□□□ 1.1
DDX55-212ENST00000544738 CC2D1BQ5T0F9 858 aaKnown RBP21.92■■□□□ 1.1
DDX55-212ENST00000544738 INTS5Q6P9B9 1019 aaKnown RBP21.92■■□□□ 1.1
DDX55-212ENST00000544738 CREBZFQ9NS37 354 aa21.91■■□□□ 1.1
DDX55-212ENST00000544738 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
DDX55-212ENST00000544738 SLC34A2O95436 690 aa21.9■■□□□ 1.1
DDX55-212ENST00000544738 NFIXQ14938 502 aa21.9■■□□□ 1.1
DDX55-212ENST00000544738 C2CD5Q86YS7 1000 aa21.9■■□□□ 1.1
DDX55-212ENST00000544738 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
DDX55-212ENST00000544738 NFKBIEO00221 500 aa21.89■■□□□ 1.09
DDX55-212ENST00000544738 CHADLQ6NUI6 762 aa21.89■■□□□ 1.09
DDX55-212ENST00000544738 H0YIN7 160 aa21.88■■□□□ 1.09
DDX55-212ENST00000544738 SERPINB2P05120 415 aa21.88■■□□□ 1.09
DDX55-212ENST00000544738 ZNF219Q9P2Y4 722 aaPredicted RBP21.88■■□□□ 1.09
DDX55-212ENST00000544738 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
DDX55-212ENST00000544738 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
DDX55-212ENST00000544738 PRDM10Q9NQV6 1147 aa21.87■■□□□ 1.09
DDX55-212ENST00000544738 ERFEQ4G0M1 354 aa21.86■■□□□ 1.09
DDX55-212ENST00000544738 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
DDX55-212ENST00000544738 POTEIP0CG38 1075 aa21.85■■□□□ 1.09
DDX55-212ENST00000544738 POTEJP0CG39 1038 aa21.85■■□□□ 1.09
DDX55-212ENST00000544738 CTCFP49711 727 aaPredicted RBP21.84■■□□□ 1.09
DDX55-212ENST00000544738 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
DDX55-212ENST00000544738 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.091e-9■■□□□ 11.9
DDX55-212ENST00000544738 NARFQ9UHQ1 456 aa21.84■■□□□ 1.09
DDX55-212ENST00000544738 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
DDX55-212ENST00000544738 C21orf2O43822 256 aa21.82■■□□□ 1.08
DDX55-212ENST00000544738 HMOX1P09601 288 aa21.82■■□□□ 1.08
DDX55-212ENST00000544738 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
DDX55-212ENST00000544738 DDNO94850 711 aaPredicted RBP21.81■■□□□ 1.08
DDX55-212ENST00000544738 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
DDX55-212ENST00000544738 CNTNAP1P78357 1384 aa21.81■■□□□ 1.08
DDX55-212ENST00000544738 CCDC88AQ3V6T2 1871 aa21.8■■□□□ 1.08
DDX55-212ENST00000544738 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
DDX55-212ENST00000544738 VEGFBP49765 207 aa21.8■■□□□ 1.08
DDX55-212ENST00000544738 LBX1P52954 281 aa21.8■■□□□ 1.08
DDX55-212ENST00000544738 BCL2L12Q9HB09 334 aa21.8■■□□□ 1.08
DDX55-212ENST00000544738 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
DDX55-212ENST00000544738 ZBTB1Q9Y2K1 713 aa21.78■■□□□ 1.08
DDX55-212ENST00000544738 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
DDX55-212ENST00000544738 SLC52A2Q9HAB3 445 aa21.77■■□□□ 1.08
DDX55-212ENST00000544738 COL15A1P39059 1388 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 CARMIL3Q8ND23 1372 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 MTHFSDQ2M296 383 aaKnown RBP21.76■■□□□ 1.07
DDX55-212ENST00000544738 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
DDX55-212ENST00000544738 AFDNP55196 1824 aaKnown RBP21.76■■□□□ 1.07
DDX55-212ENST00000544738 TMEM88BA6NKF7 163 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 U2SURPO15042 1029 aaKnown RBP21.75■■□□□ 1.07
DDX55-212ENST00000544738 RNMTO43148 476 aaKnown RBP21.75■■□□□ 1.07
DDX55-212ENST00000544738 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
DDX55-212ENST00000544738 ABHD8Q96I13 439 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 LGR6Q9HBX8 967 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 WBP1LQ9NX94 342 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 TJP1Q07157 1748 aa21.75■■□□□ 1.07
DDX55-212ENST00000544738 PDE6BP35913 854 aa21.74■■□□□ 1.07
DDX55-212ENST00000544738 LDHDQ86WU2 507 aa21.74■■□□□ 1.07
DDX55-212ENST00000544738 COL3A1P02461 1466 aaPredicted RBP21.74■■□□□ 1.07
DDX55-212ENST00000544738 PASKQ96RG2 1323 aa21.74■■□□□ 1.07
DDX55-212ENST00000544738 ADAMTS7Q9UKP4 1686 aa21.73■■□□□ 1.07
DDX55-212ENST00000544738 BRIP1Q9BX63 1249 aa21.73■■□□□ 1.07
DDX55-212ENST00000544738 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
DDX55-212ENST00000544738 EAPPQ56P03 285 aaPredicted RBP21.72■■□□□ 1.07
DDX55-212ENST00000544738 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
DDX55-212ENST00000544738 CLEC11AQ9Y240 323 aa21.72■■□□□ 1.07
DDX55-212ENST00000544738 TBC1D9BQ66K14 1250 aa21.71■■□□□ 1.07
DDX55-212ENST00000544738 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
DDX55-212ENST00000544738 MRC1P22897 1456 aa21.71■■□□□ 1.07
DDX55-212ENST00000544738 GAS2L2Q8NHY3 880 aa21.7■■□□□ 1.06
DDX55-212ENST00000544738 NUDCQ9Y266 331 aa21.7■■□□□ 1.06
DDX55-212ENST00000544738 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
DDX55-212ENST00000544738 HSPA8P11142 646 aaKnown RBP21.69■■□□□ 1.06
DDX55-212ENST00000544738 DEFB115Q30KQ5 88 aa21.69■■□□□ 1.06
DDX55-212ENST00000544738 LTBP3Q9NS15 1303 aa21.69■■□□□ 1.06
DDX55-212ENST00000544738 NRXN2Q9P2S2 1712 aa21.69■■□□□ 1.06
DDX55-212ENST00000544738 CCDC85CA6NKD9 419 aa21.68■■□□□ 1.06
DDX55-212ENST00000544738 NPHP1O15259 732 aa21.68■■□□□ 1.06
DDX55-212ENST00000544738 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
DDX55-212ENST00000544738 CNKSR1Q969H4 720 aa21.68■■□□□ 1.06
DDX55-212ENST00000544738 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
DDX55-212ENST00000544738 A0A087WZG4 1122 aa21.67■■□□□ 1.06
DDX55-212ENST00000544738 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
DDX55-212ENST00000544738 PPP2R1AP30153 589 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms