RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RBM6P78332 1123 aaKnown RBP15.05■□□□□ -0
SMG8-202ENST00000543872 CCDC144BQ3MJ40 725 aa15.05■□□□□ -0
SMG8-202ENST00000543872 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ -0
SMG8-202ENST00000543872 SYTL4Q96C24 671 aaPredicted RBP15.05■□□□□ -0
SMG8-202ENST00000543872 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
SMG8-202ENST00000543872 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
SMG8-202ENST00000543872 HNRNPH2P55795 449 aaKnown RBP15.04■□□□□ -0
SMG8-202ENST00000543872 TFIP11Q9UBB9 837 aaKnown RBP15.04■□□□□ -0
SMG8-202ENST00000543872 LIMCH1Q9UPQ0 1083 aa15.04■□□□□ -0
SMG8-202ENST00000543872 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
SMG8-202ENST00000543872 LARGE1O95461 756 aa15.04■□□□□ -0
SMG8-202ENST00000543872 RUFY3Q7L099 469 aa15.04■□□□□ -0
SMG8-202ENST00000543872 FILIP1Q7Z7B0 1213 aa15.04■□□□□ -0
SMG8-202ENST00000543872 OSBPL3Q9H4L5 887 aa15.04■□□□□ -0
SMG8-202ENST00000543872 DACT1Q9NYF0 836 aa15.04■□□□□ -0
SMG8-202ENST00000543872 CABP1Q9NZU7 370 aa15.04■□□□□ -0
SMG8-202ENST00000543872 TNNT3P45378 269 aaPredicted RBP15.04■□□□□ -0
SMG8-202ENST00000543872 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
SMG8-202ENST00000543872 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
SMG8-202ENST00000543872 POLR3GO15318 223 aaPredicted RBP15.03■□□□□ -0
SMG8-202ENST00000543872 NUTM1Q86Y26 1132 aa15.03■□□□□ -0
SMG8-202ENST00000543872 RASEFQ8IZ41 740 aa15.03■□□□□ -0
SMG8-202ENST00000543872 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
SMG8-202ENST00000543872 GGT6Q6P531 493 aa15.02■□□□□ -0
SMG8-202ENST00000543872 TTC6Q86TZ1 520 aa15.02■□□□□ -0
SMG8-202ENST00000543872 NECAB1Q8N987 351 aa15.02■□□□□ -0
SMG8-202ENST00000543872 MTMR6Q9Y217 621 aa15.02■□□□□ -0
SMG8-202ENST00000543872 ZNF165P49910 485 aa15.02■□□□□ -0
SMG8-202ENST00000543872 SLC52A1Q9NWF4 448 aa15.02■□□□□ -0
SMG8-202ENST00000543872 SNX14Q9Y5W7 946 aa15.02■□□□□ -0
SMG8-202ENST00000543872 CASTP20810 708 aaKnown RBP15.02□□□□□ -0.01
SMG8-202ENST00000543872 HSPA4P34932 840 aa15.02□□□□□ -0.01
SMG8-202ENST00000543872 SPG7Q9UQ90 795 aa15.02□□□□□ -0.01
SMG8-202ENST00000543872 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 MLECQ14165 292 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
SMG8-202ENST00000543872 TULP2O00295 520 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 G2E3Q7L622 706 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 SKILP12757 684 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 MCM10Q7L590 875 aa15.01□□□□□ -0.01
SMG8-202ENST00000543872 LRRC7Q96NW7 1537 aa15□□□□□ -0.01
SMG8-202ENST00000543872 ERCC6LQ2NKX8 1250 aa15□□□□□ -0.01
SMG8-202ENST00000543872 PLCH2O75038 1416 aa15□□□□□ -0.01
SMG8-202ENST00000543872 SOX12O15370 315 aa15□□□□□ -0.01
SMG8-202ENST00000543872 GORABQ5T7V8 394 aa15□□□□□ -0.01
SMG8-202ENST00000543872 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
SMG8-202ENST00000543872 RAD50Q92878 1312 aa15□□□□□ -0.01
SMG8-202ENST00000543872 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
SMG8-202ENST00000543872 GNAI2P04899 355 aa15□□□□□ -0.01
SMG8-202ENST00000543872 KRT85P78386 507 aa15□□□□□ -0.01
SMG8-202ENST00000543872 FBXW7Q969H0 707 aa15□□□□□ -0.01
SMG8-202ENST00000543872 USP16Q9Y5T5 823 aa15□□□□□ -0.01
SMG8-202ENST00000543872 ARHGEF40Q8TER5 1519 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 KIF24Q5T7B8 1368 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 GOLGA6L19H0YKK7 550 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 CWC27Q6UX04 472 aaKnown RBP14.99□□□□□ -0.01
SMG8-202ENST00000543872 NEK11Q8NG66 645 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 ZNF446Q9NWS9 450 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 SLU7O95391 586 aaKnown RBP14.99□□□□□ -0.01
SMG8-202ENST00000543872 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
SMG8-202ENST00000543872 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 ERO1AQ96HE7 468 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
SMG8-202ENST00000543872 BMS1Q14692 1282 aaKnown RBP14.98□□□□□ -0.01
SMG8-202ENST00000543872 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
SMG8-202ENST00000543872 PLA2G4DQ86XP0 818 aa14.98□□□□□ -0.01
SMG8-202ENST00000543872 LRRC8AQ8IWT6 810 aa14.98□□□□□ -0.01
SMG8-202ENST00000543872 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
SMG8-202ENST00000543872 RRS1Q15050 365 aaKnown RBP14.98□□□□□ -0.01
SMG8-202ENST00000543872 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
SMG8-202ENST00000543872 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
SMG8-202ENST00000543872 TMX1Q9H3N1 280 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 PNPLA6Q8IY17 1366 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 TTC14Q96N46 770 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 FEZ2Q9UHY8 353 aaPredicted RBP14.97□□□□□ -0.01
SMG8-202ENST00000543872 KCNG1Q9UIX4 513 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 A0A087WWV3 80 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 CYP2C19P33261 490 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 PDRG1Q9NUG6 133 aa14.97□□□□□ -0.01
SMG8-202ENST00000543872 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
SMG8-202ENST00000543872 CCDC69A6NI79 296 aa14.96□□□□□ -0.01
SMG8-202ENST00000543872 SPATA32Q96LK8 384 aa14.96□□□□□ -0.01
SMG8-202ENST00000543872 HTATSF1O43719 755 aaKnown RBP14.96□□□□□ -0.01
SMG8-202ENST00000543872 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.01
SMG8-202ENST00000543872 CDC37L1Q7L3B6 337 aa14.96□□□□□ -0.01
SMG8-202ENST00000543872 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.02
SMG8-202ENST00000543872 USP32Q8NFA0 1604 aa14.96□□□□□ -0.02
SMG8-202ENST00000543872 IL13P35225 146 aa14.96□□□□□ -0.02
SMG8-202ENST00000543872 LRRN4CLQ8ND94 238 aa14.96□□□□□ -0.02
SMG8-202ENST00000543872 CDK19Q9BWU1 502 aa14.96□□□□□ -0.02
SMG8-202ENST00000543872 APPP05067 770 aa14.95□□□□□ -0.02
SMG8-202ENST00000543872 BECN2A8MW95 431 aa14.95□□□□□ -0.02
SMG8-202ENST00000543872 NR1I2O75469 434 aa14.95□□□□□ -0.02
SMG8-202ENST00000543872 TET3O43151 1660 aa14.95□□□□□ -0.02
SMG8-202ENST00000543872 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
SMG8-202ENST00000543872 KIF1BO60333 1816 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms