RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
PPME1-208ENST00000543525 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
PPME1-208ENST00000543525 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
PPME1-208ENST00000543525 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
PPME1-208ENST00000543525 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
PPME1-208ENST00000543525 TEFQ10587 303 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 DNAAF4Q8WXU2 420 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 TMX3Q96JJ7 454 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
PPME1-208ENST00000543525 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
PPME1-208ENST00000543525 AMOTQ4VCS5 1084 aa16.4■□□□□ 0.22
PPME1-208ENST00000543525 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
PPME1-208ENST00000543525 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
PPME1-208ENST00000543525 ZNF445P59923 1031 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 CUL4AQ13619 759 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 PKP1Q13835 747 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 BEND3Q5T5X7 828 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
PPME1-208ENST00000543525 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 CLCN1P35523 988 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 ANP32BQ92688 251 aaKnown RBP16.39■□□□□ 0.21
PPME1-208ENST00000543525 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
PPME1-208ENST00000543525 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
PPME1-208ENST00000543525 ZDHHC9Q9Y397 364 aa16.39■□□□□ 0.21
PPME1-208ENST00000543525 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
PPME1-208ENST00000543525 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
PPME1-208ENST00000543525 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
PPME1-208ENST00000543525 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
PPME1-208ENST00000543525 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
PPME1-208ENST00000543525 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
PPME1-208ENST00000543525 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
PPME1-208ENST00000543525 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
PPME1-208ENST00000543525 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
PPME1-208ENST00000543525 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
PPME1-208ENST00000543525 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
PPME1-208ENST00000543525 KCNQ3O43525 872 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
PPME1-208ENST00000543525 PI4K2BQ8TCG2 481 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
PPME1-208ENST00000543525 ALDH1L1O75891 902 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 HSPA4P34932 840 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 ZSCAN23Q3MJ62 389 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
PPME1-208ENST00000543525 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
PPME1-208ENST00000543525 ESPNB1AK53 854 aa16.34■□□□□ 0.21
PPME1-208ENST00000543525 BRD1O95696 1058 aa16.34■□□□□ 0.21
PPME1-208ENST00000543525 PPP1R9BQ96SB3 815 aa16.34■□□□□ 0.21
PPME1-208ENST00000543525 ADCY9O60503 1353 aa16.34■□□□□ 0.21
PPME1-208ENST00000543525 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
PPME1-208ENST00000543525 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
PPME1-208ENST00000543525 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
PPME1-208ENST00000543525 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.21
PPME1-208ENST00000543525 ARHGEF25Q86VW2 580 aa16.33■□□□□ 0.21
PPME1-208ENST00000543525 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.2
PPME1-208ENST00000543525 SGSM2O43147 1006 aa16.33■□□□□ 0.2
PPME1-208ENST00000543525 MBD3O95983 291 aa16.33■□□□□ 0.2
PPME1-208ENST00000543525 GCP02774 474 aa16.33■□□□□ 0.2
PPME1-208ENST00000543525 MTX1Q13505 466 aa16.33■□□□□ 0.2
PPME1-208ENST00000543525 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.2
PPME1-208ENST00000543525 SLIT3O75094 1523 aa16.32■□□□□ 0.2
PPME1-208ENST00000543525 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
PPME1-208ENST00000543525 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
PPME1-208ENST00000543525 RAD50Q92878 1312 aa16.32■□□□□ 0.2
PPME1-208ENST00000543525 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
PPME1-208ENST00000543525 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
PPME1-208ENST00000543525 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 ANKRD24Q8TF21 1146 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
PPME1-208ENST00000543525 ANXA1P04083 346 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.24e-10■■■■□ 23.2
PPME1-208ENST00000543525 GPATCH3Q96I76 525 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
PPME1-208ENST00000543525 GIGYF1O75420 1035 aaPredicted RBP16.3■□□□□ 0.2
PPME1-208ENST00000543525 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
PPME1-208ENST00000543525 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
PPME1-208ENST00000543525 RUFY2Q8WXA3 655 aa16.3■□□□□ 0.2
PPME1-208ENST00000543525 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
PPME1-208ENST00000543525 UPF3BQ9BZI7 483 aaKnown RBP16.3■□□□□ 0.2
PPME1-208ENST00000543525 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
PPME1-208ENST00000543525 TMEM94Q12767 1356 aa16.29■□□□□ 0.2
PPME1-208ENST00000543525 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms