RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SETDB2Q96T68 719 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 FANCIQ9NVI1 1328 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 POLD1P28340 1107 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 FBLN1P23142 703 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 STK3Q13188 491 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 CCDC184Q52MB2 194 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 UBE3BQ7Z3V4 1068 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 MAP3K2Q9Y2U5 619 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 MINDY4BA8MYZ0 360 aa8.15□□□□□ -1.11
SRGAP1-206ENST00000543397 ZNF396Q96N95 335 aaPredicted RBP8.15□□□□□ -1.11
SRGAP1-206ENST00000543397 DISP3Q9P2K9 1392 aa8.15□□□□□ -1.11
SRGAP1-206ENST00000543397 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 KINO60870 393 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 NAPBQ9H115 298 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 ODF2Q5BJF6 829 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 CCAR2Q8N163 923 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 NAT10Q9H0A0 1025 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 BTG4Q9NY30 223 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 PTPRCP08575 1304 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 CTTNBP2Q8WZ74 1663 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 PI4KAP2A4QPH2 592 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 FAM83GA6ND36 823 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 LDHCP07864 332 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 PI4KAP1Q8N8J0 262 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 BOLA2Q9H3K6 86 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 NOL7Q9UMY1 257 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 LRRFIP2Q9Y608 721 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 MX1P20591 662 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 ZNF76P36508 570 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 AKAP4Q5JQC9 854 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 GOLGA6L1Q8N7Z2 621 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 PIK3R4Q99570 1358 aa8.14□□□□□ -1.11
SRGAP1-206ENST00000543397 TRPM2O94759 1503 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 FLT4P35916 1363 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 HSP90AA2PQ14568 343 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 U3KPZ7 1027 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 PEX14O75381 377 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 SLC39A6Q13433 755 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 JAKMIP1Q96N16 626 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 ZHX3Q9H4I2 956 aa8.13□□□□□ -1.11
SRGAP1-206ENST00000543397 MYO1BO43795 1136 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 ZNF444Q8N0Y2 327 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 ANXA1P04083 346 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 CCDC8Q9H0W5 538 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 CEBPZQ03701 1054 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 ZFYVE27Q5T4F4 411 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 PIBF1Q8WXW3 757 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 SEC63Q9UGP8 760 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 NPATQ14207 1427 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 NAP1L1P55209 391 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 WASF1Q92558 559 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 FEZ1Q99689 392 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRGAP1-206ENST00000543397 BAG3O95817 575 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 ANKRD18AQ8IVF6 992 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 CEP170Q5SW79 1584 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 FIBPO43427 364 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 EIF4A2Q14240 407 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 SPTY2D1Q68D10 685 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 ARID4AP29374 1257 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 PDRG1Q9NUG6 133 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 RANBP6O60518 1105 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 SSR1P43307 286 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 RNF41Q9H4P4 317 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 BMP2KQ9NSY1 1161 aaPredicted RBP8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 SLAIN2Q9P270 581 aa8.11□□□□□ -1.11
SRGAP1-206ENST00000543397 SSBP05455 408 aaKnown RBP eCLIP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 HOMER1Q86YM7 354 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 CTCFLQ8NI51 663 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 ORAI2Q96SN7 254 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 ZRANB1Q9UGI0 708 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 PIP4K2AP48426 406 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 LARP1BQ659C4 914 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 NYXQ9GZU5 481 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 PCDH11XQ9BZA7 1347 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 PCDH11YQ9BZA8 1340 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms