RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	TRIM35	Q9UPQ4	493 aa		12.04	□□□□□ -0.48
POLE-218	ENST00000542362	CHD4	Q14839	1912 aa		12.03	□□□□□ -0.48
POLE-218	ENST00000542362	APAF1	O14727	1248 aa		12.03	□□□□□ -0.48
POLE-218	ENST00000542362	TTC5	Q8N0Z6	440 aa		12.03	□□□□□ -0.48
POLE-218	ENST00000542362	KLHL34	Q8N239	644 aa		12.03	□□□□□ -0.48
POLE-218	ENST00000542362	RUNDC1	Q96C34	613 aa		12.03	□□□□□ -0.48
POLE-218	ENST00000542362	DLEC1	Q9Y238	1755 aa		12.02	□□□□□ -0.48
POLE-218	ENST00000542362	A1BG	P04217	495 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	SSFA2	P28290	1259 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	KRT24	Q2M2I5	525 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	ARHGEF1	Q92888	912 aa	Known RBP	12.02	□□□□□ -0.49
POLE-218	ENST00000542362	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.02	□□□□□ -0.49
POLE-218	ENST00000542362	USP16	Q9Y5T5	823 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	SOS1	Q07889	1333 aa	Predicted RBP	12.02	□□□□□ -0.49
POLE-218	ENST00000542362	COL15A1	P39059	1388 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	ARFGEF2	Q9Y6D5	1785 aa		12.02	□□□□□ -0.49
POLE-218	ENST00000542362	RPS6KA4	O75676	772 aa		12.01	□□□□□ -0.49
POLE-218	ENST00000542362	NEFM	P07197	916 aa		12.01	□□□□□ -0.49
POLE-218	ENST00000542362	CANX	P27824	592 aa	Known RBP	12.01	□□□□□ -0.49
POLE-218	ENST00000542362	NLGN2	Q8NFZ4	835 aa		12.01	□□□□□ -0.49
POLE-218	ENST00000542362	PNISR	Q8TF01	805 aa	Known RBP	12.01	□□□□□ -0.49
POLE-218	ENST00000542362	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.01	□□□□□ -0.49
POLE-218	ENST00000542362	CCDC87	Q9NVE4	849 aa		12.01	□□□□□ -0.49
POLE-218	ENST00000542362	RTCB	Q9Y3I0	505 aa	Known RBP	12.01	□□□□□ -0.49
POLE-218	ENST00000542362	CCDC88A	Q3V6T2	1871 aa		12.01	□□□□□ -0.49
POLE-218	ENST00000542362	LAMB2	P55268	1798 aa		12	□□□□□ -0.49
POLE-218	ENST00000542362	HTATSF1	O43719	755 aa	Known RBP	12	□□□□□ -0.49
POLE-218	ENST00000542362	TAF7	Q15545	349 aa	Predicted RBP	12	□□□□□ -0.49
POLE-218	ENST00000542362	RC3H1	Q5TC82	1133 aa	Known RBP	12	□□□□□ -0.49
POLE-218	ENST00000542362	WWC3	Q9ULE0	1092 aa		12	□□□□□ -0.49
POLE-218	ENST00000542362	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12	□□□□□ -0.49
POLE-218	ENST00000542362	GYS1	P13807	737 aa		11.99	□□□□□ -0.49
POLE-218	ENST00000542362	FMNL2	Q96PY5	1086 aa		11.99	□□□□□ -0.49
POLE-218	ENST00000542362	ARX	Q96QS3	562 aa		11.99	□□□□□ -0.49
POLE-218	ENST00000542362	SALL2	Q9Y467	1007 aa	Predicted RBP	11.99	□□□□□ -0.49
POLE-218	ENST00000542362	LAS1L	Q9Y4W2	734 aa	Known RBP	11.99	□□□□□ -0.49
POLE-218	ENST00000542362	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.99	□□□□□ -0.49
POLE-218	ENST00000542362	TAF1	P21675	1872 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	ARFGEF1	Q9Y6D6	1849 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	USP42	Q9H9J4	1324 aa	Known RBP	11.98	□□□□□ -0.49
POLE-218	ENST00000542362	NBPF26	B4DH59	902 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	EIF4A1	P60842	406 aa	Known RBP	11.98	□□□□□ -0.49
POLE-218	ENST00000542362	FKBP8	Q14318	412 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	TRAPPC3L	Q5T215	181 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	NBPF10	Q6P3W6	841 aa	Known RBP	11.98	□□□□□ -0.49
POLE-218	ENST00000542362	FAM9B	Q8IZU0	186 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	NBPF15	Q8N660	670 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.98	□□□□□ -0.49
POLE-218	ENST00000542362	SLC16A10	Q8TF71	515 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	BCL2L12	Q9HB09	334 aa		11.98	□□□□□ -0.49
POLE-218	ENST00000542362	DCAF8L1	A6NGE4	600 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	ANXA1	P04083	346 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	USPL1	Q5W0Q7	1092 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	VSIG10	Q8N0Z9	540 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	NECTIN2	Q92692	538 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	SYT17	Q9BSW7	474 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	PNN	Q9H307	717 aa	Known RBP	11.97	□□□□□ -0.49
POLE-218	ENST00000542362	TSPYL4	Q9UJ04	414 aa		11.97	□□□□□ -0.49
POLE-218	ENST00000542362	MMP10	P09238	476 aa		11.96	□□□□□ -0.49
POLE-218	ENST00000542362	RFC4	P35249	363 aa		11.96	□□□□□ -0.49
POLE-218	ENST00000542362	DDR1	Q08345	913 aa		11.96	□□□□□ -0.49
POLE-218	ENST00000542362	TBC1D2B	Q9UPU7	963 aa		11.96	□□□□□ -0.49
POLE-218	ENST00000542362	CARMIL3	Q8ND23	1372 aa		11.95	□□□□□ -0.5
POLE-218	ENST00000542362	GIGYF1	O75420	1035 aa	Predicted RBP	11.95	□□□□□ -0.5
POLE-218	ENST00000542362	POLD1	P28340	1107 aa		11.95	□□□□□ -0.5
POLE-218	ENST00000542362	EIF5	P55010	431 aa	Known RBP	11.95	□□□□□ -0.5
POLE-218	ENST00000542362	FLAD1	Q8NFF5	587 aa		11.95	□□□□□ -0.5
POLE-218	ENST00000542362	SBF1	O95248	1867 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	PROSER3	Q2NL68	480 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	CCDC24	Q8N4L8	307 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	NGEF	Q8N5V2	710 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	PXDNL	A1KZ92	1463 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	DDX60	Q8IY21	1712 aa	Known RBP	11.94	□□□□□ -0.5
POLE-218	ENST00000542362	CACNA1F	O60840	1977 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	C10orf71	Q711Q0	1435 aa		11.94	□□□□□ -0.5
POLE-218	ENST00000542362	SNRPA1	P09661	255 aa	Known RBP	11.93	□□□□□ -0.5
POLE-218	ENST00000542362	BICDL1	Q6ZP65	573 aa		11.93	□□□□□ -0.5
POLE-218	ENST00000542362	MBIP	Q9NS73	344 aa		11.93	□□□□□ -0.5
POLE-218	ENST00000542362	CHL1	O00533	1208 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	STARD3NL	O95772	234 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	MYL6B	P14649	208 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	ADRA2B	P18089	450 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	EIF2S2	P20042	333 aa	Known RBP	11.92	□□□□□ -0.5
POLE-218	ENST00000542362	LMOD3	Q0VAK6	560 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	TBC1D9B	Q66K14	1250 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	TTLL7	Q6ZT98	887 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	TSR2	Q969E8	191 aa	Known RBP	11.92	□□□□□ -0.5
POLE-218	ENST00000542362	ZNF428	Q96B54	188 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	NARF	Q9UHQ1	456 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	SLX4	Q8IY92	1834 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	SPEF2	Q9C093	1822 aa		11.92	□□□□□ -0.5
POLE-218	ENST00000542362	POLRMT	O00411	1230 aa	Known RBP	11.91	□□□□□ -0.5
POLE-218	ENST00000542362	ELL2	O00472	640 aa	Predicted RBP	11.91	□□□□□ -0.5
POLE-218	ENST00000542362	CAMTA2	O94983	1202 aa		11.91	□□□□□ -0.5
POLE-218	ENST00000542362	ZNF853	P0CG23	659 aa		11.91	□□□□□ -0.5
POLE-218	ENST00000542362	NFIX	Q14938	502 aa		11.91	□□□□□ -0.5
POLE-218	ENST00000542362	PELP1	Q8IZL8	1130 aa	Known RBP	11.91	□□□□□ -0.5
POLE-218	ENST00000542362	MIER1	Q8N108	512 aa		11.91	□□□□□ -0.5
POLE-218	ENST00000542362	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.91	□□□□□ -0.5
POLE-218	ENST00000542362	ZPR1	O75312	459 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms