RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TBC1D22AQ8WUA7 517 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 JARID2Q92833 1246 aaPredicted RBP6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NBPF3Q9H094 633 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SUFUQ9UMX1 484 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ZNF446Q9NWS9 450 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 AKAP12Q02952 1782 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TMPOP42166 694 aaKnown RBP6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TDO2P48775 406 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NCBP1Q09161 790 aaKnown RBP6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ZC3H12AQ5D1E8 599 aaKnown RBP6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ZRANB1Q9UGI0 708 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PAXBP1Q9Y5B6 917 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TOPAZ1Q8N9V7 1692 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 AATKQ6ZMQ8 1374 aa6.93□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PTCH1Q13635 1447 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 IQUBQ8NA54 791 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TSC1Q92574 1164 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 AMOTL2Q9Y2J4 779 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TBX22Q9Y458 520 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 JRKLQ9Y4A0 524 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.92□□□□□ -1.32e-8■■■■■ 39.5
RAB3GAP1-207ENST00000539493 ITSN1Q15811 1721 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 LRRC7Q96NW7 1537 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CCDC196A0A1B0GTZ2 297 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 EMILIN1Q9Y6C2 1016 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 DIP2AQ14689 1571 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NRKQ7Z2Y5 1582 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 RARSP54136 660 aaKnown RBP6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 COG3Q96JB2 828 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CEP89Q96ST8 783 aa6.92□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CDK12Q9NYV4 1490 aaPredicted RBP6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 GOLGA6L6A8MZA4 724 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 FCHSD2O94868 740 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 MAP2P11137 1827 aaKnown RBP6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PLEKHG2Q9H7P9 1386 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NUTM2FA1L443 756 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 COQ9O75208 318 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PDE3AQ14432 1141 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CCDC96Q2M329 555 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ACEP12821 1306 aa6.91□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CEP170BQ9Y4F5 1589 aaPredicted RBP6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 A0A1B0GUL7 405 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PLEKHG3A1L390 1219 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 MYO1CO00159 1063 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CTAGE5O15320 804 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CPP00450 1065 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 LIG1P18858 919 aa6.9□□□□□ -1.3
RAB3GAP1-207ENST00000539493 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NEFHP12036 1026 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 IL13P35225 146 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ZSCAN23Q3MJ62 389 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 MAP9Q49MG5 647 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TXLNBQ8N3L3 684 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 USP6P35125 1406 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PRKAR2BP31323 418 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RRS1Q15050 365 aaKnown RBP6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 LRCH2Q5VUJ6 765 aa6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 XRN1Q8IZH2 1706 aaKnown RBP6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.31
RAB3GAP1-207ENST00000539493 IL16Q14005 1332 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TTC21BQ7Z4L5 1316 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 OVOS2A0A0J9YW53 1432 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 OVOS2Q6IE36 1432 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 INHBEP58166 350 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SSH2Q76I76 1423 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 HMOX1P09601 288 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ARID4AP29374 1257 aaPredicted RBP6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ATP6V1AP38606 617 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PANK1Q8TE04 598 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 BCL2L13Q9BXK5 485 aa6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RIMS1Q86UR5 1692 aaKnown RBP6.89□□□□□ -1.31
RAB3GAP1-207ENST00000539493 GOLGA6L22H0YM25 854 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 C21orf2O43822 256 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CT47B1P0C2W7 299 aaPredicted RBP6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RABEP1Q15276 862 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ZNF397Q8NF99 534 aaPredicted RBP6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 DNAJC21Q5F1R6 531 aaKnown RBP6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TSHZ1Q6ZSZ6 1077 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SRLQ86TD4 932 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 MPNDQ8N594 471 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PHACTR3Q96KR7 559 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 COG6Q9Y2V7 657 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 MRVI1Q9Y6F6 885 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PIK3R4Q99570 1358 aa6.88□□□□□ -1.31
RAB3GAP1-207ENST00000539493 KCNA6P17658 529 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 EXOSC9Q06265 439 aaKnown RBP6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NALCNQ8IZF0 1738 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms