RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 DDX11L8A8MPP1 907 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 RAPGEF4Q8WZA2 1011 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 HYPKQ9NX55 129 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 CRYBG1Q9Y4K1 1723 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 KSR2Q6VAB6 950 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 NPHP3Q7Z494 1330 aa21.98■■□□□ 1.11
GNE-204ENST00000539208 MTX1Q13505 466 aa21.97■■□□□ 1.11
GNE-204ENST00000539208 HDAC5Q9UQL6 1122 aa21.97■■□□□ 1.11
GNE-204ENST00000539208 SRGAP3O43295 1099 aa21.97■■□□□ 1.11
GNE-204ENST00000539208 SURF6O75683 361 aaKnown RBP21.97■■□□□ 1.11
GNE-204ENST00000539208 HSP90AB4PQ58FF6 505 aa21.97■■□□□ 1.11
GNE-204ENST00000539208 ESYT1Q9BSJ8 1104 aa21.97■■□□□ 1.11
GNE-204ENST00000539208 SCN11AQ9UI33 1791 aa21.96■■□□□ 1.11
GNE-204ENST00000539208 ANXA1P04083 346 aa21.96■■□□□ 1.11
GNE-204ENST00000539208 TNPO1Q92973 898 aaKnown RBP21.96■■□□□ 1.11
GNE-204ENST00000539208 KIF1BPQ96EK5 621 aa21.96■■□□□ 1.11
GNE-204ENST00000539208 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
GNE-204ENST00000539208 TATP17735 454 aaPredicted RBP21.95■■□□□ 1.1
GNE-204ENST00000539208 RHPN1Q8TCX5 695 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 CHMLP26374 656 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 TSHZ3Q63HK5 1081 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 MAP3K2Q9Y2U5 619 aa21.95■■□□□ 1.1
GNE-204ENST00000539208 ST18O60284 1047 aa21.94■■□□□ 1.1
GNE-204ENST00000539208 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
GNE-204ENST00000539208 EPB41L2O43491 1005 aaKnown RBP21.94■■□□□ 1.1
GNE-204ENST00000539208 PHKG2P15735 406 aa21.94■■□□□ 1.1
GNE-204ENST00000539208 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
GNE-204ENST00000539208 GBP4Q96PP9 640 aa21.94■■□□□ 1.1
GNE-204ENST00000539208 SLC52A2Q9HAB3 445 aa21.94■■□□□ 1.1
GNE-204ENST00000539208 KDM6AO15550 1401 aaPredicted RBP21.93■■□□□ 1.1
GNE-204ENST00000539208 TRAK2O60296 914 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 TRIM6-TRIM34B2RNG4 842 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
GNE-204ENST00000539208 PTMSP20962 102 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 CLEC17AQ6ZS10 378 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 IL1RAPL2Q9NP60 686 aa21.92■■□□□ 1.1
GNE-204ENST00000539208 PRAMEF22A3QJZ6 481 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 DDX17Q92841 729 aaKnown RBP21.91■■□□□ 1.1
GNE-204ENST00000539208 RILPL2Q969X0 211 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 IL17RAQ96F46 866 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 CPDO75976 1380 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 UTYO14607 1347 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 MEGF6O75095 1541 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 PDIA6Q15084 440 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
GNE-204ENST00000539208 C9orf78Q9NZ63 289 aaPredicted RBP21.91■■□□□ 1.1
GNE-204ENST00000539208 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
GNE-204ENST00000539208 ANAPC15P60006 121 aa21.9■■□□□ 1.1
GNE-204ENST00000539208 MRC1P22897 1456 aa21.9■■□□□ 1.1
GNE-204ENST00000539208 PI4K2BQ8TCG2 481 aa21.89■■□□□ 1.1
GNE-204ENST00000539208 MCCP23508 829 aa21.89■■□□□ 1.09
GNE-204ENST00000539208 NUTM1Q86Y26 1132 aa21.89■■□□□ 1.09
GNE-204ENST00000539208 CWC22Q9HCG8 908 aaKnown RBP21.89■■□□□ 1.09
GNE-204ENST00000539208 FOXD4L1Q9NU39 408 aa21.89■■□□□ 1.09
GNE-204ENST00000539208 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
GNE-204ENST00000539208 IL27Q8NEV9 243 aa21.88■■□□□ 1.09
GNE-204ENST00000539208 PKD1L3Q7Z443 1732 aa21.88■■□□□ 1.09
GNE-204ENST00000539208 L1TD1Q5T7N2 865 aaKnown RBP21.88■■□□□ 1.09
GNE-204ENST00000539208 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
GNE-204ENST00000539208 CSB-PGBD3P0DP91 1061 aa21.87■■□□□ 1.09
GNE-204ENST00000539208 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
GNE-204ENST00000539208 C5P01031 1676 aa21.86■■□□□ 1.09
GNE-204ENST00000539208 TTC41PQ6P2S7 1318 aa21.86■■□□□ 1.09
GNE-204ENST00000539208 MCM2P49736 904 aa21.86■■□□□ 1.09
GNE-204ENST00000539208 NUCB2P80303 420 aa21.86■■□□□ 1.09
GNE-204ENST00000539208 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
GNE-204ENST00000539208 GRM8O00222 908 aa21.85■■□□□ 1.09
GNE-204ENST00000539208 SKOR2Q2VWA4 1001 aaPredicted RBP21.85■■□□□ 1.09
GNE-204ENST00000539208 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
GNE-204ENST00000539208 SLC39A6Q13433 755 aa21.85■■□□□ 1.09
GNE-204ENST00000539208 CWF19L2Q2TBE0 894 aaKnown RBP21.85■■□□□ 1.09
GNE-204ENST00000539208 LARP1Q6PKG0 1096 aaKnown RBP21.84■■□□□ 1.09
GNE-204ENST00000539208 ANO2Q9NQ90 1003 aa21.84■■□□□ 1.09
GNE-204ENST00000539208 FSD2A1L4K1 749 aa21.84■■□□□ 1.09
GNE-204ENST00000539208 AK9Q5TCS8 1911 aa21.83■■□□□ 1.09
GNE-204ENST00000539208 CYP27B1O15528 508 aa21.83■■□□□ 1.09
GNE-204ENST00000539208 CYP2E1P05181 493 aaPredicted RBP21.83■■□□□ 1.09
GNE-204ENST00000539208 SSFA2P28290 1259 aa21.83■■□□□ 1.09
GNE-204ENST00000539208 CNTROBQ8N137 903 aa21.83■■□□□ 1.09
GNE-204ENST00000539208 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
GNE-204ENST00000539208 XIRP1Q702N8 1843 aaKnown RBP21.83■■□□□ 1.08
GNE-204ENST00000539208 CHRNA2Q15822 529 aa21.82■■□□□ 1.08
GNE-204ENST00000539208 CLASRPQ8N2M8 674 aaKnown RBP21.82■■□□□ 1.08
GNE-204ENST00000539208 BRPF3Q9ULD4 1205 aa21.82■■□□□ 1.08
GNE-204ENST00000539208 GLRX3O76003 335 aaKnown RBP21.82■■□□□ 1.08
GNE-204ENST00000539208 SNRPA1P09661 255 aaKnown RBP21.82■■□□□ 1.08
GNE-204ENST00000539208 OS9Q13438 667 aaPredicted RBP21.82■■□□□ 1.08
GNE-204ENST00000539208 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
GNE-204ENST00000539208 NEK4P51957 841 aa21.81■■□□□ 1.08
GNE-204ENST00000539208 KAZALD1Q96I82 304 aa21.81■■□□□ 1.08
GNE-204ENST00000539208 PARP4Q9UKK3 1724 aaKnown RBP21.81■■□□□ 1.08
GNE-204ENST00000539208 IGKV5-2P06315 115 aa21.81■■□□□ 1.08
GNE-204ENST00000539208 AIMP1Q12904 312 aaKnown RBP21.81■■□□□ 1.08
GNE-204ENST00000539208 RIC3Q7Z5B4 369 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms