RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 LAMB4A4D0S4 1761 aa25.47■■□□□ 1.67
CDH5-202ENST00000539168 C5P01031 1676 aa25.47■■□□□ 1.67
CDH5-202ENST00000539168 RGS3P49796 1198 aa25.47■■□□□ 1.67
CDH5-202ENST00000539168 HMMRO75330 724 aa25.46■■□□□ 1.67
CDH5-202ENST00000539168 GNAI2P04899 355 aa25.46■■□□□ 1.67
CDH5-202ENST00000539168 KSR2Q6VAB6 950 aa25.46■■□□□ 1.67
CDH5-202ENST00000539168 MEIS3Q99687 375 aa25.46■■□□□ 1.67
CDH5-202ENST00000539168 C1orf115Q9H7X2 142 aa25.46■■□□□ 1.67
CDH5-202ENST00000539168 UNC5CLQ8IV45 518 aa25.45■■□□□ 1.67
CDH5-202ENST00000539168 HDAC5Q9UQL6 1122 aa25.45■■□□□ 1.67
CDH5-202ENST00000539168 PI4KAP2A4QPH2 592 aa25.45■■□□□ 1.66
CDH5-202ENST00000539168 PI4KAP1Q8N8J0 262 aa25.45■■□□□ 1.66
CDH5-202ENST00000539168 IBTKQ9P2D0 1353 aaPredicted RBP25.44■■□□□ 1.66
CDH5-202ENST00000539168 TOGARAM1Q9Y4F4 1720 aa25.44■■□□□ 1.66
CDH5-202ENST00000539168 PRAMEF22A3QJZ6 481 aa25.43■■□□□ 1.66
CDH5-202ENST00000539168 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
CDH5-202ENST00000539168 PDE4AP27815 886 aa25.43■■□□□ 1.66
CDH5-202ENST00000539168 PDIA6Q15084 440 aa25.43■■□□□ 1.66
CDH5-202ENST00000539168 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
CDH5-202ENST00000539168 NUCB1Q02818 461 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 DDB1Q16531 1140 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 TEX13AQ9BXU3 409 aaPredicted RBP25.42■■□□□ 1.66
CDH5-202ENST00000539168 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 ADCY9O60503 1353 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 SIRT2Q8IXJ6 389 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 BACH2Q9BYV9 841 aa25.42■■□□□ 1.66
CDH5-202ENST00000539168 BEND3Q5T5X7 828 aa25.41■■□□□ 1.66
CDH5-202ENST00000539168 VSIG10Q8N0Z9 540 aa25.41■■□□□ 1.66
CDH5-202ENST00000539168 NGLY1Q96IV0 654 aa25.41■■□□□ 1.66
CDH5-202ENST00000539168 GLI3P10071 1580 aa25.41■■□□□ 1.66
CDH5-202ENST00000539168 VPS72Q15906 364 aa25.4■■□□□ 1.66
CDH5-202ENST00000539168 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
CDH5-202ENST00000539168 FNBP4Q8N3X1 1017 aaPredicted RBP25.4■■□□□ 1.66
CDH5-202ENST00000539168 DCTPP1Q9H773 170 aa25.4■■□□□ 1.66
CDH5-202ENST00000539168 USP16Q9Y5T5 823 aa25.4■■□□□ 1.66
CDH5-202ENST00000539168 ANXA1P04083 346 aa25.39■■□□□ 1.66
CDH5-202ENST00000539168 UBTFL1P0CB47 393 aaPredicted RBP25.39■■□□□ 1.66
CDH5-202ENST00000539168 PROSER3Q2NL68 480 aa25.39■■□□□ 1.66
CDH5-202ENST00000539168 CCDC9Q9Y3X0 531 aaKnown RBP25.39■■□□□ 1.66
CDH5-202ENST00000539168 CHD1LQ86WJ1 897 aa25.39■■□□□ 1.65
CDH5-202ENST00000539168 SKAP1Q86WV1 359 aa25.39■■□□□ 1.65
CDH5-202ENST00000539168 MAP3K2Q9Y2U5 619 aa25.39■■□□□ 1.65
CDH5-202ENST00000539168 USP44Q9H0E7 712 aa25.38■■□□□ 1.65
CDH5-202ENST00000539168 ZBTB47Q9UFB7 747 aaPredicted RBP25.38■■□□□ 1.65
CDH5-202ENST00000539168 ITGB4P16144 1822 aa25.37■■□□□ 1.65
CDH5-202ENST00000539168 LINS1Q8NG48 757 aa25.37■■□□□ 1.65
CDH5-202ENST00000539168 C8orf37Q96NL8 207 aa25.37■■□□□ 1.65
CDH5-202ENST00000539168 BCL9O00512 1426 aa25.37■■□□□ 1.65
CDH5-202ENST00000539168 NEXNQ0ZGT2 675 aa25.36■■□□□ 1.65
CDH5-202ENST00000539168 PIGBQ92521 554 aa25.36■■□□□ 1.65
CDH5-202ENST00000539168 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.36■■□□□ 1.65
CDH5-202ENST00000539168 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
CDH5-202ENST00000539168 BCL9LQ86UU0 1499 aa25.35■■□□□ 1.65
CDH5-202ENST00000539168 MYL6BP14649 208 aa25.34■■□□□ 1.65
CDH5-202ENST00000539168 ATP8B2P98198 1209 aa25.34■■□□□ 1.65
CDH5-202ENST00000539168 ANKRD45Q5TZF3 282 aa25.34■■□□□ 1.65
CDH5-202ENST00000539168 XAGE3Q8WTP9 111 aa25.34■■□□□ 1.65
CDH5-202ENST00000539168 COPS6Q7L5N1 327 aa25.33■■□□□ 1.65
CDH5-202ENST00000539168 LRP10Q7Z4F1 713 aa25.33■■□□□ 1.65
CDH5-202ENST00000539168 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
CDH5-202ENST00000539168 ANKRD13DQ6ZTN6 518 aa25.32■■□□□ 1.64
CDH5-202ENST00000539168 PTCD1O75127 700 aaKnown RBP25.32■■□□□ 1.64
CDH5-202ENST00000539168 ATG3Q9NT62 314 aa25.32■■□□□ 1.64
CDH5-202ENST00000539168 METTL22Q9BUU2 404 aaPredicted RBP25.31■■□□□ 1.64
CDH5-202ENST00000539168 STARD3NLO95772 234 aa25.3■■□□□ 1.64
CDH5-202ENST00000539168 C9orf78Q9NZ63 289 aaPredicted RBP25.3■■□□□ 1.64
CDH5-202ENST00000539168 LRRFIP2Q9Y608 721 aaKnown RBP25.3■■□□□ 1.64
CDH5-202ENST00000539168 PLBD2Q8NHP8 589 aa25.29■■□□□ 1.64
CDH5-202ENST00000539168 LNPKQ9C0E8 428 aa25.29■■□□□ 1.64
CDH5-202ENST00000539168 USP21Q9UK80 565 aa25.29■■□□□ 1.64
CDH5-202ENST00000539168 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
CDH5-202ENST00000539168 UTYO14607 1347 aa25.28■■□□□ 1.64
CDH5-202ENST00000539168 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
CDH5-202ENST00000539168 HSPA1LP34931 641 aa25.27■■□□□ 1.64
CDH5-202ENST00000539168 C8orf34Q49A92 452 aa25.27■■□□□ 1.64
CDH5-202ENST00000539168 MEX3CQ5U5Q3 659 aaKnown RBP25.27■■□□□ 1.64
CDH5-202ENST00000539168 MARCH10Q8NA82 808 aaPredicted RBP25.26■■□□□ 1.63
CDH5-202ENST00000539168 PRIM1P49642 420 aaKnown RBP25.26■■□□□ 1.63
CDH5-202ENST00000539168 SSH3Q8TE77 659 aa25.26■■□□□ 1.63
CDH5-202ENST00000539168 SYTL4Q96C24 671 aaPredicted RBP25.26■■□□□ 1.63
CDH5-202ENST00000539168 NBPF26B4DH59 902 aa25.25■■□□□ 1.63
CDH5-202ENST00000539168 GRM8O00222 908 aa25.25■■□□□ 1.63
CDH5-202ENST00000539168 NBPF14Q5TI25 921 aa25.25■■□□□ 1.63
CDH5-202ENST00000539168 NBPF10Q6P3W6 841 aaKnown RBP25.25■■□□□ 1.63
CDH5-202ENST00000539168 NBPF15Q8N660 670 aa25.25■■□□□ 1.63
CDH5-202ENST00000539168 NBPF7P0C2Y1 421 aaPredicted RBP25.24■■□□□ 1.63
CDH5-202ENST00000539168 MTX1Q13505 466 aa25.24■■□□□ 1.63
CDH5-202ENST00000539168 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
CDH5-202ENST00000539168 FAM98CQ17RN3 349 aaKnown RBP25.23■■□□□ 1.63
CDH5-202ENST00000539168 NEURL1BA8MQ27 555 aa25.23■■□□□ 1.63
CDH5-202ENST00000539168 ARFGEF2Q9Y6D5 1785 aa25.22■■□□□ 1.63
CDH5-202ENST00000539168 A1BGP04217 495 aa25.22■■□□□ 1.63
CDH5-202ENST00000539168 POLA2Q14181 598 aa25.22■■□□□ 1.63
CDH5-202ENST00000539168 CWF19L2Q2TBE0 894 aaKnown RBP25.22■■□□□ 1.63
CDH5-202ENST00000539168 HSP90AB4PQ58FF6 505 aa25.22■■□□□ 1.63
CDH5-202ENST00000539168 SMARCC1Q92922 1105 aaPredicted RBP25.22■■□□□ 1.63
CDH5-202ENST00000539168 MYD88Q99836 296 aa25.22■■□□□ 1.63
CDH5-202ENST00000539168 RAB11FIP3O75154 756 aa25.21■■□□□ 1.63
CDH5-202ENST00000539168 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
CDH5-202ENST00000539168 GCKRQ14397 625 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms