RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
DDB1-208ENST00000537120 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
DDB1-208ENST00000537120 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
DDB1-208ENST00000537120 C1QTNF8P60827 252 aa11.14□□□□□ -0.63
DDB1-208ENST00000537120 BICDL1Q6ZP65 573 aa11.14□□□□□ -0.63
DDB1-208ENST00000537120 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
DDB1-208ENST00000537120 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
DDB1-208ENST00000537120 NARFQ9UHQ1 456 aa11.14□□□□□ -0.63
DDB1-208ENST00000537120 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
DDB1-208ENST00000537120 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
DDB1-208ENST00000537120 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
DDB1-208ENST00000537120 NPHP1O15259 732 aa11.13□□□□□ -0.63
DDB1-208ENST00000537120 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
DDB1-208ENST00000537120 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
DDB1-208ENST00000537120 PNNQ9H307 717 aaKnown RBP11.13□□□□□ -0.63
DDB1-208ENST00000537120 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
DDB1-208ENST00000537120 TM4SF1P30408 202 aa11.12□□□□□ -0.63
DDB1-208ENST00000537120 DDR1Q08345 913 aa11.12□□□□□ -0.63
DDB1-208ENST00000537120 MCM10Q7L590 875 aa11.12□□□□□ -0.63
DDB1-208ENST00000537120 CICQ96RK0 1608 aaPredicted RBP11.12□□□□□ -0.63
DDB1-208ENST00000537120 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
DDB1-208ENST00000537120 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
DDB1-208ENST00000537120 A1BGP04217 495 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 SERPINB2P05120 415 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 DCTN1Q14203 1278 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 NFIXQ14938 502 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 COL15A1P39059 1388 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
DDB1-208ENST00000537120 VIRMAQ69YN4 1812 aaKnown RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 KCNQ3O43525 872 aa11.1□□□□□ -0.63
DDB1-208ENST00000537120 HTATSF1O43719 755 aaKnown RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 CHRNA5P30532 468 aa11.1□□□□□ -0.63
DDB1-208ENST00000537120 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 DDX10Q13206 875 aaKnown RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
DDB1-208ENST00000537120 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 ATP10DQ9P241 1426 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 PXDNLA1KZ92 1463 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 H0YIN7 160 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
DDB1-208ENST00000537120 IL6STP40189 918 aaPredicted RBP11.09□□□□□ -0.63
DDB1-208ENST00000537120 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 C4AP0C0L4 1744 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 TJP1Q07157 1748 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 C10orf71Q711Q0 1435 aa11.09□□□□□ -0.63
DDB1-208ENST00000537120 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
DDB1-208ENST00000537120 MRC1P22897 1456 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 RALBP1Q15311 655 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 C2CD5Q86YS7 1000 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 PNISRQ8TF01 805 aaKnown RBP11.08□□□□□ -0.64
DDB1-208ENST00000537120 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 KCPQ6ZWJ8 1503 aa11.08□□□□□ -0.64
DDB1-208ENST00000537120 KCNA3P22001 575 aa11.07□□□□□ -0.64
DDB1-208ENST00000537120 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
DDB1-208ENST00000537120 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
DDB1-208ENST00000537120 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-208ENST00000537120 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
DDB1-208ENST00000537120 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
DDB1-208ENST00000537120 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
DDB1-208ENST00000537120 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
DDB1-208ENST00000537120 C9orf131Q5VYM1 1079 aa11.06□□□□□ -0.64
DDB1-208ENST00000537120 NGEFQ8N5V2 710 aa11.06□□□□□ -0.64
DDB1-208ENST00000537120 TTLL6Q8N841 843 aa11.06□□□□□ -0.64
DDB1-208ENST00000537120 ZBTB22O15209 634 aa11.05□□□□□ -0.64
DDB1-208ENST00000537120 PDE6BP35913 854 aa11.05□□□□□ -0.64
DDB1-208ENST00000537120 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
DDB1-208ENST00000537120 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
DDB1-208ENST00000537120 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
DDB1-208ENST00000537120 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
DDB1-208ENST00000537120 ZNF652Q9Y2D9 606 aa11.05□□□□□ -0.64
DDB1-208ENST00000537120 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
DDB1-208ENST00000537120 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
DDB1-208ENST00000537120 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
DDB1-208ENST00000537120 ST5P78524 1137 aa11.04□□□□□ -0.64
DDB1-208ENST00000537120 PDZRN3Q9UPQ7 1066 aa11.04□□□□□ -0.64
DDB1-208ENST00000537120 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
DDB1-208ENST00000537120 KIF13BQ9NQT8 1826 aa11.04□□□□□ -0.64
DDB1-208ENST00000537120 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
DDB1-208ENST00000537120 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
DDB1-208ENST00000537120 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
DDB1-208ENST00000537120 RIPK4P57078 832 aa11.03□□□□□ -0.64
DDB1-208ENST00000537120 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDB1-208ENST00000537120 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
DDB1-208ENST00000537120 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
DDB1-208ENST00000537120 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
DDB1-208ENST00000537120 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 PRR5LQ6MZQ0 368 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 TPTE2Q6XPS3 522 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 PLEKHF1Q96S99 279 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
DDB1-208ENST00000537120 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 CARMIL3Q8ND23 1372 aa11.02□□□□□ -0.65
DDB1-208ENST00000537120 MYL6BP14649 208 aa11.01□□□□□ -0.65
DDB1-208ENST00000537120 LMOD3Q0VAK6 560 aa11.01□□□□□ -0.65
DDB1-208ENST00000537120 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms