RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
KNL1-212ENST00000534204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.328e-9■■□□□ 13.5
KNL1-212ENST00000534204 SCN4AP35499 1836 aa17.07■□□□□ 0.32
KNL1-212ENST00000534204 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
KNL1-212ENST00000534204 SPG7Q9UQ90 795 aa17.07■□□□□ 0.32
KNL1-212ENST00000534204 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
KNL1-212ENST00000534204 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
KNL1-212ENST00000534204 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
KNL1-212ENST00000534204 MLLT1Q03111 559 aaPredicted RBP17.05■□□□□ 0.32
KNL1-212ENST00000534204 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
KNL1-212ENST00000534204 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
KNL1-212ENST00000534204 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
KNL1-212ENST00000534204 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
KNL1-212ENST00000534204 EYA1Q99502 592 aa17.03■□□□□ 0.32
KNL1-212ENST00000534204 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
KNL1-212ENST00000534204 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
KNL1-212ENST00000534204 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
KNL1-212ENST00000534204 AIDAQ96BJ3 306 aa17.01■□□□□ 0.31
KNL1-212ENST00000534204 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
KNL1-212ENST00000534204 INTS5Q6P9B9 1019 aaKnown RBP17■□□□□ 0.31
KNL1-212ENST00000534204 SLX4Q8IY92 1834 aa16.99■□□□□ 0.31
KNL1-212ENST00000534204 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
KNL1-212ENST00000534204 NFIXQ14938 502 aa16.98■□□□□ 0.31
KNL1-212ENST00000534204 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
KNL1-212ENST00000534204 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
KNL1-212ENST00000534204 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
KNL1-212ENST00000534204 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
KNL1-212ENST00000534204 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
KNL1-212ENST00000534204 PDE4DIPQ5VU43 2346 aa16.97■□□□□ 0.31
KNL1-212ENST00000534204 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
KNL1-212ENST00000534204 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
KNL1-212ENST00000534204 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
KNL1-212ENST00000534204 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.3
KNL1-212ENST00000534204 SCN7AQ01118 1682 aa16.95■□□□□ 0.3
KNL1-212ENST00000534204 CCDC85CA6NKD9 419 aa16.95■□□□□ 0.3
KNL1-212ENST00000534204 ERFEQ4G0M1 354 aa16.95■□□□□ 0.3
KNL1-212ENST00000534204 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
KNL1-212ENST00000534204 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
KNL1-212ENST00000534204 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
KNL1-212ENST00000534204 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
KNL1-212ENST00000534204 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
KNL1-212ENST00000534204 TAF1DQ9H5J8 278 aaPredicted RBP16.93■□□□□ 0.3
KNL1-212ENST00000534204 ST20-MTHFSA0A0A6YYL1 179 aa16.92■□□□□ 0.3
KNL1-212ENST00000534204 SERPINB2P05120 415 aa16.92■□□□□ 0.3
KNL1-212ENST00000534204 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
KNL1-212ENST00000534204 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
KNL1-212ENST00000534204 CASP8AP2Q9UKL3 1982 aa16.91■□□□□ 0.3
KNL1-212ENST00000534204 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
KNL1-212ENST00000534204 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
KNL1-212ENST00000534204 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
KNL1-212ENST00000534204 COL15A1P39059 1388 aa16.9■□□□□ 0.3
KNL1-212ENST00000534204 C21orf2O43822 256 aa16.9■□□□□ 0.3
KNL1-212ENST00000534204 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
KNL1-212ENST00000534204 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
KNL1-212ENST00000534204 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
KNL1-212ENST00000534204 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
KNL1-212ENST00000534204 H0YIN7 160 aa16.88■□□□□ 0.29
KNL1-212ENST00000534204 CABP4P57796 275 aa16.88■□□□□ 0.29
KNL1-212ENST00000534204 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
KNL1-212ENST00000534204 MRC1P22897 1456 aa16.87■□□□□ 0.29
KNL1-212ENST00000534204 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
KNL1-212ENST00000534204 ZPR1O75312 459 aa16.87■□□□□ 0.29
KNL1-212ENST00000534204 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
KNL1-212ENST00000534204 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
KNL1-212ENST00000534204 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
KNL1-212ENST00000534204 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
KNL1-212ENST00000534204 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
KNL1-212ENST00000534204 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
KNL1-212ENST00000534204 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
KNL1-212ENST00000534204 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
KNL1-212ENST00000534204 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
KNL1-212ENST00000534204 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
KNL1-212ENST00000534204 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
KNL1-212ENST00000534204 MCOLN1Q9GZU1 580 aa16.84■□□□□ 0.29
KNL1-212ENST00000534204 TSKSQ9UJT2 592 aa16.84■□□□□ 0.29
KNL1-212ENST00000534204 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
KNL1-212ENST00000534204 MAP1SQ66K74 1059 aaPredicted RBP16.83■□□□□ 0.28
KNL1-212ENST00000534204 COL4A5P29400 1685 aa16.82■□□□□ 0.28
KNL1-212ENST00000534204 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
KNL1-212ENST00000534204 ZNF622Q969S3 477 aaKnown RBP eCLIP16.82■□□□□ 0.283e-6■□□□□ 10.6
KNL1-212ENST00000534204 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
KNL1-212ENST00000534204 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
KNL1-212ENST00000534204 CCDC24Q8N4L8 307 aa16.81■□□□□ 0.28
KNL1-212ENST00000534204 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
KNL1-212ENST00000534204 CAPNS2Q96L46 248 aa16.81■□□□□ 0.28
KNL1-212ENST00000534204 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
KNL1-212ENST00000534204 EPHX2P34913 555 aa16.8■□□□□ 0.28
KNL1-212ENST00000534204 MTHFSP49914 203 aa16.8■□□□□ 0.28
KNL1-212ENST00000534204 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
KNL1-212ENST00000534204 BRIP1Q9BX63 1249 aa16.8■□□□□ 0.28
KNL1-212ENST00000534204 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
KNL1-212ENST00000534204 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
KNL1-212ENST00000534204 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
KNL1-212ENST00000534204 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
KNL1-212ENST00000534204 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
KNL1-212ENST00000534204 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
KNL1-212ENST00000534204 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.28
KNL1-212ENST00000534204 ABT1Q9ULW3 272 aaKnown RBP16.79■□□□□ 0.28
KNL1-212ENST00000534204 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
KNL1-212ENST00000534204 SRGNP10124 158 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms