RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 IFIT2P09913 472 aaKnown RBP4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 TRIM63Q969Q1 353 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 IL17RAQ96F46 866 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 PRIMPOLQ96LW4 560 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 CHMP4BQ9H444 224 aaKnown RBP4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 INTUQ9ULD6 942 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 NDUFB5O43674 189 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 COL9A1P20849 921 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 TEX19Q8NA77 164 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 TRIM44Q96DX7 344 aaPredicted RBP4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 METTL5Q9NRN9 209 aaKnown RBP4.84□□□□□ -1.63
ARHGEF12-209ENST00000530388 NEUROD6Q96NK8 337 aa4.84□□□□□ -1.64
ARHGEF12-209ENST00000530388 MKNK1Q9BUB5 465 aa4.84□□□□□ -1.64
ARHGEF12-209ENST00000530388 TMX1Q9H3N1 280 aa4.84□□□□□ -1.64
ARHGEF12-209ENST00000530388 TSKSQ9UJT2 592 aa4.84□□□□□ -1.64
ARHGEF12-209ENST00000530388 C6orf132Q5T0Z8 1188 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 NBPF11Q86T75 865 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ZNF654Q8IZM8 581 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 DUSP9Q99956 384 aaKnown RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ARPC5LQ9BPX5 153 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 RBM42Q9BTD8 480 aaKnown RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATG3Q9NT62 314 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 PARP2Q9UGN5 583 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 TIMM44O43615 452 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 IRX5P78411 483 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ANO1Q5XXA6 986 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 CCDC70Q6NSX1 233 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 PTCD2Q8WV60 388 aaKnown RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 CLP1Q92989 425 aaKnown RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 FANCLQ9NW38 375 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 NBPF7P0C2Y1 421 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 NBPF1Q3BBV0 1214 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 OCSTAMPQ9BR26 566 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ERBB3P21860 1342 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 GOLGA6CA6NDK9 693 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 GOLGA6BA6NDN3 693 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 GOLGA6DP0CG33 693 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 CCDC92Q53HC0 331 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 GOLGA6AQ9NYA3 693 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 KCNG1Q9UIX4 513 aa4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 FBXO2Q9UK22 296 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 DNMT3AQ9Y6K1 912 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF12-209ENST00000530388 ICMTO60725 284 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 C10orf62Q5T681 223 aaPredicted RBP4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 KHSRPQ92945 711 aaKnown RBP eCLIP4.82□□□□□ -1.648e-8■■■■□ 19.7
ARHGEF12-209ENST00000530388 CDCA7LQ96GN5 454 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 MYCBPQ99417 103 aaPredicted RBP4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 TTF2Q9UNY4 1162 aaKnown RBP4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 C21orf2O43822 256 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 VDRP11473 427 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 DPYDQ12882 1025 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 CBLBQ13191 982 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 KCTD2Q14681 263 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 COL19A1Q14993 1142 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 ZNF354CQ86Y25 554 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 STAG1Q8WVM7 1258 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 ZBTB3Q9H5J0 574 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 EVLQ9UI08 416 aaPredicted RBP4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 G3V3G9 751 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATICP31939 592 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 USP48Q86UV5 1035 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 ANKMY2Q8IV38 441 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 APPBP2Q92624 585 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 CCDC34Q96HJ3 373 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 PCDHGB7Q9Y5F8 929 aa4.82□□□□□ -1.64
ARHGEF12-209ENST00000530388 GALR2O43603 387 aaPredicted RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 SMAP1Q8IYB5 467 aaPredicted RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 RGL4Q8IZJ4 473 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 FAM196BA6NMK8 535 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 HMMRO75330 724 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 LDHCP07864 332 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 SLC10A3P09131 477 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 FANCCQ00597 558 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 RPAINQ86UA6 219 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 RPUSD2Q8IZ73 545 aaKnown RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 TSR2Q969E8 191 aaKnown RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 HINFPQ9BQA5 517 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 IER2Q9BTL4 223 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 NR1I2O75469 434 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 RBL2Q08999 1139 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 GRAMD1BQ3KR37 738 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 MYRIPQ8NFW9 859 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 CPLX3Q8WVH0 158 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 ATP5J2-PTCD1G3V325 749 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 SLC26A4O43511 780 aa4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 HCLS1P14317 486 aaPredicted RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 FKBP4Q02790 459 aaKnown RBP eCLIP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 TTC39BQ5VTQ0 682 aaPredicted RBP4.81□□□□□ -1.64
ARHGEF12-209ENST00000530388 SIX5Q8N196 739 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms