RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ATP1A2P50993 1020 aa7.05□□□□□ -1.28
CTR9-205ENST00000529898 POTEAQ6S8J7 498 aa7.05□□□□□ -1.28
CTR9-205ENST00000529898 C7orf43Q8WVR3 580 aa7.05□□□□□ -1.28
CTR9-205ENST00000529898 GLMNQ92990 594 aa7.05□□□□□ -1.28
CTR9-205ENST00000529898 KIAA1024Q9UPX6 916 aa7.05□□□□□ -1.28
CTR9-205ENST00000529898 RNF225M0QZC1 329 aaPredicted RBP7.04□□□□□ -1.28
CTR9-205ENST00000529898 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
CTR9-205ENST00000529898 FIGNL1Q6PIW4 674 aa7.04□□□□□ -1.28
CTR9-205ENST00000529898 SIX5Q8N196 739 aa7.04□□□□□ -1.28
CTR9-205ENST00000529898 ZCCHC2Q9C0B9 1178 aaKnown RBP7.04□□□□□ -1.28
CTR9-205ENST00000529898 ENAMQ9NRM1 1142 aa7.04□□□□□ -1.28
CTR9-205ENST00000529898 MKRN1Q9UHC7 482 aaKnown RBP7.04□□□□□ -1.28
CTR9-205ENST00000529898 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
CTR9-205ENST00000529898 PALM3A6NDB9 673 aaPredicted RBP7.03□□□□□ -1.28
CTR9-205ENST00000529898 C2CD2LO14523 706 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 OIP5O43482 229 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 NBPF1Q3BBV0 1214 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 CCDC102BQ68D86 513 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 ZDHHC1Q8WTX9 485 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 KLRG1Q96E93 195 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 ZIC5Q96T25 663 aa7.03□□□□□ -1.28
CTR9-205ENST00000529898 MAFBQ9Y5Q3 323 aaPredicted RBP7.03□□□□□ -1.28
CTR9-205ENST00000529898 A0A1W2PNR3 127 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 NOS2P35228 1153 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 RASSF7Q02833 373 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 PSME1Q06323 249 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 FAM182BQ5T319 152 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 SAMD5Q5TGI4 173 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 TPCN2Q8NHX9 752 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 AIDAQ96BJ3 306 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 SCARF2Q96GP6 870 aaPredicted RBP7.02□□□□□ -1.29
CTR9-205ENST00000529898 OXCT2Q9BYC2 517 aaPredicted RBP7.02□□□□□ -1.29
CTR9-205ENST00000529898 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
CTR9-205ENST00000529898 HCN2Q9UL51 889 aa7.02□□□□□ -1.29
CTR9-205ENST00000529898 GPC6Q9Y625 555 aaPredicted RBP7.02□□□□□ -1.29
CTR9-205ENST00000529898 EML1O00423 815 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 TATP17735 454 aaPredicted RBP7.01□□□□□ -1.29
CTR9-205ENST00000529898 FGFR3P22607 806 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 HIRAP54198 1017 aaPredicted RBP7.01□□□□□ -1.29
CTR9-205ENST00000529898 TNP2Q05952 138 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 SLC9A9Q8IVB4 645 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 TNS4Q8IZW8 715 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 L3MBTL2Q969R5 705 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 ABHD17AQ96GS6 310 aa7.01□□□□□ -1.29
CTR9-205ENST00000529898 GDF2Q9UK05 429 aaPredicted RBP7.01□□□□□ -1.29
CTR9-205ENST00000529898 FAM157BP0CG42 384 aa7□□□□□ -1.29
CTR9-205ENST00000529898 MARSP56192 900 aaKnown RBP7□□□□□ -1.29
CTR9-205ENST00000529898 CTBSQ01459 385 aa7□□□□□ -1.29
CTR9-205ENST00000529898 KANK3Q6NY19 840 aa7□□□□□ -1.29
CTR9-205ENST00000529898 TMEM151AQ8N4L1 468 aa7□□□□□ -1.29
CTR9-205ENST00000529898 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
CTR9-205ENST00000529898 ATXN7O15265 892 aaPredicted RBP6.99□□□□□ -1.29
CTR9-205ENST00000529898 EFSO43281 561 aa6.99□□□□□ -1.29
CTR9-205ENST00000529898 TXLNAP40222 546 aa6.99□□□□□ -1.29
CTR9-205ENST00000529898 KANK4Q5T7N3 995 aaPredicted RBP6.99□□□□□ -1.29
CTR9-205ENST00000529898 C1orf53Q5VUE5 145 aa6.99□□□□□ -1.29
CTR9-205ENST00000529898 C1orf229Q6ZS94 237 aaPredicted RBP6.99□□□□□ -1.29
CTR9-205ENST00000529898 STAG2Q8N3U4 1231 aa6.99□□□□□ -1.29
CTR9-205ENST00000529898 GDF11O95390 407 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 ARAFP10398 606 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 MAPTP10636 758 aaKnown RBP6.98□□□□□ -1.29
CTR9-205ENST00000529898 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 ARSJQ5FYB0 599 aaPredicted RBP6.98□□□□□ -1.29
CTR9-205ENST00000529898 SLCO4C1Q6ZQN7 724 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 GOLGA6L1Q8N7Z2 621 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 CALR3Q96L12 384 aaKnown RBP6.98□□□□□ -1.29
CTR9-205ENST00000529898 AVENQ9NQS1 362 aaPredicted RBP6.98□□□□□ -1.29
CTR9-205ENST00000529898 PARP3Q9Y6F1 533 aa6.98□□□□□ -1.29
CTR9-205ENST00000529898 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
CTR9-205ENST00000529898 C21orf2O43822 256 aa6.97□□□□□ -1.29
CTR9-205ENST00000529898 BMP4P12644 408 aa6.97□□□□□ -1.29
CTR9-205ENST00000529898 PSMA6P60900 246 aaKnown RBP6.97□□□□□ -1.29
CTR9-205ENST00000529898 BEND7Q8N7W2 519 aaPredicted RBP6.97□□□□□ -1.29
CTR9-205ENST00000529898 GAS2L2Q8NHY3 880 aa6.97□□□□□ -1.29
CTR9-205ENST00000529898 TSPAN10Q9H1Z9 355 aaPredicted RBP6.97□□□□□ -1.29
CTR9-205ENST00000529898 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 HOXB4P17483 251 aaPredicted RBP6.96□□□□□ -1.3
CTR9-205ENST00000529898 RASA1P20936 1047 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 IRS1P35568 1242 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 PTK7Q13308 1070 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 GALNT6Q8NCL4 622 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 EDARADDQ8WWZ3 215 aa6.96□□□□□ -1.3
CTR9-205ENST00000529898 DNMT3AQ9Y6K1 912 aaPredicted RBP6.96□□□□□ -1.3
CTR9-205ENST00000529898 FAM196BA6NMK8 535 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 SFI1A8K8P3 1242 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 SEC13P55735 322 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 TBCELQ5QJ74 424 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 SH3PXD2AQ5TCZ1 1133 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 TSEN2Q8NCE0 465 aaKnown RBP6.95□□□□□ -1.3
CTR9-205ENST00000529898 KLF15Q9UIH9 416 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 GGA1Q9UJY5 639 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
CTR9-205ENST00000529898 EPXP11678 715 aa6.94□□□□□ -1.3
CTR9-205ENST00000529898 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
CTR9-205ENST00000529898 BICDL1Q6ZP65 573 aa6.94□□□□□ -1.3
CTR9-205ENST00000529898 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms