RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 KLRG1Q96E93 195 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 YTHDC1Q96MU7 727 aaKnown RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 MYH16Q9H6N6 1097 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 POLR3EQ9NVU0 708 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 PATL2C9JE40 543 aaKnown RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 TPD52L2O43399 206 aaKnown RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 MARCH6O60337 910 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 THBS1P07996 1170 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 RAB15P59190 212 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 POU4F2Q12837 409 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 SKIV2LQ15477 1246 aaKnown RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 SH3D19Q5HYK7 790 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 ZBTB33Q86T24 672 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 HELBQ8NG08 1087 aaPredicted RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 SPATA32Q96LK8 384 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 NUCKS1Q9H1E3 243 aaKnown RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 GOLGA2P5Q9HBQ8 144 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 FKBPLQ9UIM3 349 aa3.69□□□□□ -1.82
FDFT1-216ENST00000529521 GDF2Q9UK05 429 aaPredicted RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 ZC3H4Q9UPT8 1303 aaKnown RBP3.69□□□□□ -1.82
FDFT1-216ENST00000529521 GNB5O14775 395 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 GPC1P35052 558 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 MMP14P50281 582 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 NEUROD1Q13562 356 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 IRF5Q13568 498 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 RSPO4Q2I0M5 234 aaPredicted RBP3.68□□□□□ -1.82
FDFT1-216ENST00000529521 AXDND1Q5T1B0 1012 aaPredicted RBP3.68□□□□□ -1.82
FDFT1-216ENST00000529521 ARTNQ5T4W7 220 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 NME8Q8N427 588 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 CFHR5Q9BXR6 569 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 ZFP64Q9NPA5 681 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 IGSF5Q9NSI5 407 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 TERF2IPQ9NYB0 399 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 AMOTL2Q9Y2J4 779 aa3.68□□□□□ -1.82
FDFT1-216ENST00000529521 AMPD1P23109 780 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 TUSC1Q2TAM9 212 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 NBPF20Q3BBV1 942 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 MYSM1Q5VVJ2 828 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 NBPF10Q6P3W6 841 aaKnown RBP3.67□□□□□ -1.82
FDFT1-216ENST00000529521 TSHZ1Q6ZSZ6 1077 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 NBPF11Q86T75 865 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 NBPF15Q8N660 670 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 GOLGA6L1Q8N7Z2 621 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 PROCA1Q8NCQ7 364 aaPredicted RBP3.67□□□□□ -1.82
FDFT1-216ENST00000529521 ADAM32Q8TC27 787 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 CYLDQ9NQC7 956 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 SLC52A1Q9NWF4 448 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 SUGT1Q9Y2Z0 365 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 PPME1Q9Y570 386 aa3.67□□□□□ -1.82
FDFT1-216ENST00000529521 A0A1W2PRU2 124 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 TTC36A6NLP5 189 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 ESPNB1AK53 854 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 MEN1O00255 615 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 C2CD2LO14523 706 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 TRAK2O60296 914 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 F11P03951 625 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 GATA4P43694 442 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 DGKGP49619 791 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 CLK2P49760 499 aaKnown RBP3.66□□□□□ -1.82
FDFT1-216ENST00000529521 CTDSPL2Q05D32 466 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 NBPF1Q3BBV0 1214 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 NKAPLQ5M9Q1 402 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 RINLQ6ZS11 566 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 BTBD6Q96KE9 485 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
FDFT1-216ENST00000529521 ARID1BQ8NFD5 2236 aaPredicted RBP3.65□□□□□ -1.83
FDFT1-216ENST00000529521 UNCXA6NJT0 531 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 ATP5J2-PTCD1G3V325 749 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 PIK3R2O00459 728 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 ERCC3P19447 782 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 PTK2Q05397 1052 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 UBAP2LQ14157 1087 aaKnown RBP3.65□□□□□ -1.83
FDFT1-216ENST00000529521 MYBPC2Q14324 1141 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 RALBP1Q15311 655 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 CDCA8Q53HL2 280 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 WDR44Q5JSH3 913 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 GORABQ5T7V8 394 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 SLCO4C1Q6ZQN7 724 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 PPARGC1BQ86YN6 1023 aaKnown RBP3.65□□□□□ -1.83
FDFT1-216ENST00000529521 CEP120Q8N960 986 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 CCER1Q8TC90 406 aaPredicted RBP3.65□□□□□ -1.83
FDFT1-216ENST00000529521 GRIP2Q9C0E4 1043 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 TIMMDC1Q9NPL8 285 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 NOP53Q9NZM5 478 aaKnown RBP3.65□□□□□ -1.83
FDFT1-216ENST00000529521 GGA1Q9UJY5 639 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 DCAF1Q9Y4B6 1507 aa3.65□□□□□ -1.83
FDFT1-216ENST00000529521 ANKRD62A6NC57 917 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 SPATA31C2B4DYI2 1134 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 EPXP11678 715 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 MCCD1P59942 119 aaPredicted RBP3.64□□□□□ -1.83
FDFT1-216ENST00000529521 NR6A1Q15406 480 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 SLC27A3Q5K4L6 730 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 APBB1IPQ7Z5R6 666 aaPredicted RBP3.64□□□□□ -1.83
FDFT1-216ENST00000529521 RETREG2Q8NC44 543 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 LRRN4Q8WUT4 740 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 SIRT1Q96EB6 747 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.64□□□□□ -1.832e-7■■■□□ 16.6
FDFT1-216ENST00000529521 PHF24Q9UPV7 400 aa3.64□□□□□ -1.83
FDFT1-216ENST00000529521 GPSM3Q9Y4H4 160 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms