RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
CAPN1-216ENST00000528739 SOS1Q07889 1333 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-216ENST00000528739 RIPK4P57078 832 aa18.84■□□□□ 0.61
CAPN1-216ENST00000528739 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
CAPN1-216ENST00000528739 ZNF831Q5JPB2 1677 aa18.84■□□□□ 0.61
CAPN1-216ENST00000528739 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
CAPN1-216ENST00000528739 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
CAPN1-216ENST00000528739 FKBP8Q14318 412 aa18.83■□□□□ 0.6
CAPN1-216ENST00000528739 THUMPD2Q9BTF0 503 aaKnown RBP18.83■□□□□ 0.6
CAPN1-216ENST00000528739 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
CAPN1-216ENST00000528739 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
CAPN1-216ENST00000528739 COL5A3P25940 1745 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-216ENST00000528739 TJP1Q07157 1748 aa18.82■□□□□ 0.6
CAPN1-216ENST00000528739 COL15A1P39059 1388 aa18.81■□□□□ 0.6
CAPN1-216ENST00000528739 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
CAPN1-216ENST00000528739 A0A087WZG4 1122 aa18.81■□□□□ 0.6
CAPN1-216ENST00000528739 A1BGP04217 495 aa18.81■□□□□ 0.6
CAPN1-216ENST00000528739 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
CAPN1-216ENST00000528739 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
CAPN1-216ENST00000528739 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
CAPN1-216ENST00000528739 MYH14Q7Z406 1995 aaKnown RBP18.79■□□□□ 0.6
CAPN1-216ENST00000528739 PRAMEF22A3QJZ6 481 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 TMPOP42166 694 aaKnown RBP18.79■□□□□ 0.6
CAPN1-216ENST00000528739 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-216ENST00000528739 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 BICDL1Q6ZP65 573 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
CAPN1-216ENST00000528739 ANP32CO43423 234 aa18.77■□□□□ 0.6
CAPN1-216ENST00000528739 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.63e-6■□□□□ 8.1
CAPN1-216ENST00000528739 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
CAPN1-216ENST00000528739 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
CAPN1-216ENST00000528739 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
CAPN1-216ENST00000528739 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.6
CAPN1-216ENST00000528739 A0A0G2JLW4 131 aa18.76■□□□□ 0.59
CAPN1-216ENST00000528739 CICQ96RK0 1608 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-216ENST00000528739 NPHP1O15259 732 aa18.75■□□□□ 0.59
CAPN1-216ENST00000528739 TGFB2P61812 414 aa18.75■□□□□ 0.59
CAPN1-216ENST00000528739 DDR1Q08345 913 aa18.75■□□□□ 0.59
CAPN1-216ENST00000528739 TM4SF1P30408 202 aa18.74■□□□□ 0.59
CAPN1-216ENST00000528739 NFIXQ14938 502 aa18.74■□□□□ 0.59
CAPN1-216ENST00000528739 DZIP3Q86Y13 1208 aaKnown RBP18.74■□□□□ 0.59
CAPN1-216ENST00000528739 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
CAPN1-216ENST00000528739 UBR2Q8IWV8 1755 aa18.73■□□□□ 0.59
CAPN1-216ENST00000528739 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
CAPN1-216ENST00000528739 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
CAPN1-216ENST00000528739 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-216ENST00000528739 SERPINB2P05120 415 aa18.72■□□□□ 0.59
CAPN1-216ENST00000528739 DPEP1P16444 411 aa18.72■□□□□ 0.59
CAPN1-216ENST00000528739 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
CAPN1-216ENST00000528739 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
CAPN1-216ENST00000528739 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
CAPN1-216ENST00000528739 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-216ENST00000528739 EIF2S2P20042 333 aaKnown RBP18.7■□□□□ 0.58
CAPN1-216ENST00000528739 TBC1D9BQ66K14 1250 aa18.7■□□□□ 0.58
CAPN1-216ENST00000528739 MYL6BP14649 208 aa18.69■□□□□ 0.58
CAPN1-216ENST00000528739 SETDB2Q96T68 719 aa18.69■□□□□ 0.58
CAPN1-216ENST00000528739 C10orf71Q711Q0 1435 aa18.68■□□□□ 0.58
CAPN1-216ENST00000528739 APAF1O14727 1248 aa18.68■□□□□ 0.58
CAPN1-216ENST00000528739 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
CAPN1-216ENST00000528739 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
CAPN1-216ENST00000528739 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 CHRNA5P30532 468 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
CAPN1-216ENST00000528739 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 MRS2Q9HD23 443 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 PIM2Q9P1W9 311 aa18.67■□□□□ 0.58
CAPN1-216ENST00000528739 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 ARHGAP27Q6ZUM4 889 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
CAPN1-216ENST00000528739 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
CAPN1-216ENST00000528739 FAM177BA6PVY3 158 aa18.65■□□□□ 0.58
CAPN1-216ENST00000528739 DALRD3Q5D0E6 543 aaKnown RBP18.65■□□□□ 0.58
CAPN1-216ENST00000528739 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
CAPN1-216ENST00000528739 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-216ENST00000528739 ST5P78524 1137 aa18.63■□□□□ 0.57
CAPN1-216ENST00000528739 CLEC4GQ6UXB4 293 aa18.63■□□□□ 0.57
CAPN1-216ENST00000528739 C2CD5Q86YS7 1000 aa18.63■□□□□ 0.57
CAPN1-216ENST00000528739 CNBD1Q8NA66 436 aa18.63■□□□□ 0.57
CAPN1-216ENST00000528739 NIP7Q9Y221 180 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN1-216ENST00000528739 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
CAPN1-216ENST00000528739 H0YIN7 160 aa18.62■□□□□ 0.57
CAPN1-216ENST00000528739 KCNA3P22001 575 aa18.62■□□□□ 0.57
CAPN1-216ENST00000528739 GTF2E1P29083 439 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-216ENST00000528739 NBPF5PQ86XG9 351 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-216ENST00000528739 ZNF622Q969S3 477 aaKnown RBP eCLIP18.62■□□□□ 0.57
CAPN1-216ENST00000528739 CHL1O00533 1208 aa18.61■□□□□ 0.57
CAPN1-216ENST00000528739 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
CAPN1-216ENST00000528739 PDE6BP35913 854 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 HLFQ16534 295 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 PRR5LQ6MZQ0 368 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms