RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
C11orf54-207ENST00000528288 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
C11orf54-207ENST00000528288 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
C11orf54-207ENST00000528288 GADD45BO75293 160 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-207ENST00000528288 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
C11orf54-207ENST00000528288 DIP2AQ14689 1571 aa9.06□□□□□ -0.96
C11orf54-207ENST00000528288 MCCP23508 829 aa9.06□□□□□ -0.96
C11orf54-207ENST00000528288 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-207ENST00000528288 TEFQ10587 303 aa9.06□□□□□ -0.96
C11orf54-207ENST00000528288 CWC22Q9HCG8 908 aaKnown RBP9.06□□□□□ -0.96
C11orf54-207ENST00000528288 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
C11orf54-207ENST00000528288 EIF4A1P60842 406 aaKnown RBP9.06□□□□□ -0.96
C11orf54-207ENST00000528288 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
C11orf54-207ENST00000528288 ANP32BQ92688 251 aaKnown RBP9.05□□□□□ -0.96
C11orf54-207ENST00000528288 ORAI2Q96SN7 254 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-207ENST00000528288 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 DNAAF4Q8WXU2 420 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 PIK3C2AO00443 1686 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 SSH3Q8TE77 659 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 SIL1Q9H173 461 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
C11orf54-207ENST00000528288 PTMSP20962 102 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-207ENST00000528288 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 PI4K2BQ8TCG2 481 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 HTATSF1O43719 755 aaKnown RBP9.04□□□□□ -0.96
C11orf54-207ENST00000528288 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 C9orf78Q9NZ63 289 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-207ENST00000528288 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
C11orf54-207ENST00000528288 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-207ENST00000528288 SLC39A6Q13433 755 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 STAP2Q9UGK3 403 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 NALCNQ8IZF0 1738 aa9.04□□□□□ -0.96
C11orf54-207ENST00000528288 LARGE1O95461 756 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 CCDC173Q0VFZ6 552 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 IP6K1Q92551 441 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 TCEANC2Q96MN5 208 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 CCDC8Q9H0W5 538 aaPredicted RBP9.03□□□□□ -0.96
C11orf54-207ENST00000528288 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
C11orf54-207ENST00000528288 SNX14Q9Y5W7 946 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 FMN2Q9NZ56 1722 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 BRD1O95696 1058 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
C11orf54-207ENST00000528288 ZNF445P59923 1031 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 ZC3H6P61129 1189 aaKnown RBP9.03□□□□□ -0.96
C11orf54-207ENST00000528288 PTH1RQ03431 593 aa9.03□□□□□ -0.96
C11orf54-207ENST00000528288 MYL6BP14649 208 aa9.02□□□□□ -0.96
C11orf54-207ENST00000528288 AK2P54819 239 aa9.02□□□□□ -0.96
C11orf54-207ENST00000528288 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.96
C11orf54-207ENST00000528288 ADCK5Q3MIX3 580 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 USP48Q86UV5 1035 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 CNPY2Q9Y2B0 182 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 NWD1Q149M9 1564 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 CASTP20810 708 aaKnown RBP9.02□□□□□ -0.97
C11orf54-207ENST00000528288 POLA2Q14181 598 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 PRPF40BQ6NWY9 871 aaKnown RBP9.02□□□□□ -0.97
C11orf54-207ENST00000528288 KIF1BPQ96EK5 621 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
C11orf54-207ENST00000528288 SGSM2O43147 1006 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 KIAA1211Q6ZU35 1233 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 ADCY9O60503 1353 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 HSPA4P34932 840 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 CUL4AQ13619 759 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 AACSQ86V21 672 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 NECAB1Q8N987 351 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 LSG1Q9H089 658 aaKnown RBP9.01□□□□□ -0.97
C11orf54-207ENST00000528288 DIAPH3Q9NSV4 1193 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
C11orf54-207ENST00000528288 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
C11orf54-207ENST00000528288 RUFY3Q7L099 469 aa9.01□□□□□ -0.97
C11orf54-207ENST00000528288 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
C11orf54-207ENST00000528288 FIBPO43427 364 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 CNTROBQ8N137 903 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 FAM227BQ96M60 508 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 RNMTO43148 476 aaKnown RBP9□□□□□ -0.97
C11orf54-207ENST00000528288 GCP02774 474 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 CHGBP05060 677 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 LRSAM1Q6UWE0 723 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 JAKMIP1Q96N16 626 aaKnown RBP9□□□□□ -0.97
C11orf54-207ENST00000528288 RAB11FIP3O75154 756 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
C11orf54-207ENST00000528288 ZSCAN30Q86W11 494 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 ANKRD24Q8TF21 1146 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 BOLA2Q9H3K6 86 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
C11orf54-207ENST00000528288 KCNJ4P48050 445 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 PLCB2Q00722 1185 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 PLEKHO1Q53GL0 409 aaPredicted RBP9□□□□□ -0.97
C11orf54-207ENST00000528288 SUCLG2Q96I99 432 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 TAF6LQ9Y6J9 622 aa9□□□□□ -0.97
C11orf54-207ENST00000528288 CLASRPQ8N2M8 674 aaKnown RBP8.99□□□□□ -0.97
C11orf54-207ENST00000528288 FAM208AQ9UK61 1670 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms