RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 NFIXQ14938 502 aa16.27■□□□□ 0.2
CHKA-203ENST00000525155 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
CHKA-203ENST00000525155 GPBP1L1Q9HC44 474 aaPredicted RBP16.27■□□□□ 0.2
CHKA-203ENST00000525155 NUDCQ9Y266 331 aa16.27■□□□□ 0.2
CHKA-203ENST00000525155 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.19
CHKA-203ENST00000525155 TJP1Q07157 1748 aa16.26■□□□□ 0.19
CHKA-203ENST00000525155 FCHSD2O94868 740 aa16.26■□□□□ 0.19
CHKA-203ENST00000525155 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
CHKA-203ENST00000525155 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
CHKA-203ENST00000525155 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
CHKA-203ENST00000525155 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
CHKA-203ENST00000525155 SCN11AQ9UI33 1791 aa16.25■□□□□ 0.19
CHKA-203ENST00000525155 EIF5P55010 431 aaKnown RBP16.24■□□□□ 0.19
CHKA-203ENST00000525155 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
CHKA-203ENST00000525155 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
CHKA-203ENST00000525155 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
CHKA-203ENST00000525155 ZPR1O75312 459 aa16.23■□□□□ 0.19
CHKA-203ENST00000525155 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
CHKA-203ENST00000525155 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
CHKA-203ENST00000525155 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
CHKA-203ENST00000525155 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
CHKA-203ENST00000525155 PRELPP51888 382 aa16.22■□□□□ 0.19
CHKA-203ENST00000525155 N4BP2Q86UW6 1770 aaPredicted RBP16.22■□□□□ 0.19
CHKA-203ENST00000525155 A1BGP04217 495 aa16.21■□□□□ 0.19
CHKA-203ENST00000525155 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
CHKA-203ENST00000525155 COL15A1P39059 1388 aa16.21■□□□□ 0.19
CHKA-203ENST00000525155 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
CHKA-203ENST00000525155 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
CHKA-203ENST00000525155 SERPINB2P05120 415 aa16.2■□□□□ 0.18
CHKA-203ENST00000525155 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
CHKA-203ENST00000525155 C9orf131Q5VYM1 1079 aa16.2■□□□□ 0.18
CHKA-203ENST00000525155 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
CHKA-203ENST00000525155 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
CHKA-203ENST00000525155 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
CHKA-203ENST00000525155 STARD3NLO95772 234 aa16.18■□□□□ 0.18
CHKA-203ENST00000525155 TEFQ10587 303 aa16.18■□□□□ 0.18
CHKA-203ENST00000525155 DCTN1Q14203 1278 aa16.18■□□□□ 0.18
CHKA-203ENST00000525155 TBC1D9BQ66K14 1250 aa16.18■□□□□ 0.18
CHKA-203ENST00000525155 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
CHKA-203ENST00000525155 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
CHKA-203ENST00000525155 CARMIL3Q8ND23 1372 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 HSPA6P17066 643 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 BICDL1Q6ZP65 573 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 MCM10Q7L590 875 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
CHKA-203ENST00000525155 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
CHKA-203ENST00000525155 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
CHKA-203ENST00000525155 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHKA-203ENST00000525155 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
CHKA-203ENST00000525155 CAMTA2O94983 1202 aa16.15■□□□□ 0.18
CHKA-203ENST00000525155 NEFMP07197 916 aa16.14■□□□□ 0.17
CHKA-203ENST00000525155 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
CHKA-203ENST00000525155 RASSF7Q02833 373 aa16.14■□□□□ 0.17
CHKA-203ENST00000525155 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
CHKA-203ENST00000525155 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
CHKA-203ENST00000525155 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
CHKA-203ENST00000525155 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHKA-203ENST00000525155 C2CD5Q86YS7 1000 aa16.13■□□□□ 0.17
CHKA-203ENST00000525155 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
CHKA-203ENST00000525155 BRCA1P38398 1863 aaKnown RBP16.13■□□□□ 0.17
CHKA-203ENST00000525155 A0A087WZG4 1122 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 TOMM70O94826 608 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
CHKA-203ENST00000525155 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 DNAJC5GQ8N7S2 189 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
CHKA-203ENST00000525155 NFKBIEO00221 500 aa16.11■□□□□ 0.17
CHKA-203ENST00000525155 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
CHKA-203ENST00000525155 PLEKHF1Q96S99 279 aa16.11■□□□□ 0.17
CHKA-203ENST00000525155 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
CHKA-203ENST00000525155 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
CHKA-203ENST00000525155 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
CHKA-203ENST00000525155 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
CHKA-203ENST00000525155 H0YIN7 160 aa16.09■□□□□ 0.17
CHKA-203ENST00000525155 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
CHKA-203ENST00000525155 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
CHKA-203ENST00000525155 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
CHKA-203ENST00000525155 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.16
CHKA-203ENST00000525155 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
CHKA-203ENST00000525155 HTRA3P83110 453 aa16.07■□□□□ 0.16
CHKA-203ENST00000525155 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
CHKA-203ENST00000525155 THUMPD2Q9BTF0 503 aaKnown RBP16.07■□□□□ 0.16
CHKA-203ENST00000525155 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
CHKA-203ENST00000525155 MAPK8IP3Q9UPT6 1336 aa16.06■□□□□ 0.16
CHKA-203ENST00000525155 POTECB2RU33 542 aa16.06■□□□□ 0.16
CHKA-203ENST00000525155 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
CHKA-203ENST00000525155 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
CHKA-203ENST00000525155 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHKA-203ENST00000525155 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
CHKA-203ENST00000525155 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
CHKA-203ENST00000525155 ARFGEF1Q9Y6D6 1849 aa16.05■□□□□ 0.16
CHKA-203ENST00000525155 C21orf2O43822 256 aa16.05■□□□□ 0.16
CHKA-203ENST00000525155 LMNB1P20700 586 aa16.05■□□□□ 0.16
CHKA-203ENST00000525155 HLFQ16534 295 aa16.05■□□□□ 0.16
CHKA-203ENST00000525155 RBM46Q8TBY0 533 aaKnown RBP16.05■□□□□ 0.16
CHKA-203ENST00000525155 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms