RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 EFSO43281 561 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 DKK1O94907 266 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 EPXP11678 715 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 TNP2Q05952 138 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 FAM182BQ5T319 152 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 TBC1D9Q6ZT07 1266 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 GALNT6Q8NCL4 622 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 EDARADDQ8WWZ3 215 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 ZIC5Q96T25 663 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 NIFKQ9BYG3 293 aaKnown RBP4.18□□□□□ -1.74
CD44-212ENST00000524922 ZDHHC3Q9NYG2 299 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 SCHIP1Q9P0W5 487 aaPredicted RBP4.18□□□□□ -1.74
CD44-212ENST00000524922 SERTAD1Q9UHV2 236 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 GGA1Q9UJY5 639 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 GDF2Q9UK05 429 aaPredicted RBP4.18□□□□□ -1.74
CD44-212ENST00000524922 PHF24Q9UPV7 400 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 KIAA1024Q9UPX6 916 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 PCDHGC4Q9Y5F7 938 aa4.18□□□□□ -1.74
CD44-212ENST00000524922 A0A1W2PNR3 127 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 PHF20L1A8MW92 1017 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 ARAFP10398 606 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 MAPTP10636 758 aaKnown RBP4.17□□□□□ -1.74
CD44-212ENST00000524922 DGKGP49619 791 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 SEMA3FQ13275 785 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 NCOA4Q13772 614 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 EFHC2Q5JST6 749 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 SAMD5Q5TGI4 173 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 FCHSD1Q86WN1 690 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 GOLGA6L1Q8N7Z2 621 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 NEDD1Q8NHV4 660 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 SUV39H2Q9H5I1 410 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 STRN4Q9NRL3 753 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 ZNF358Q9NW07 568 aa4.17□□□□□ -1.74
CD44-212ENST00000524922 NSFL1CQ9UNZ2 370 aaKnown RBP4.17□□□□□ -1.74
CD44-212ENST00000524922 USP17L5A8MUK1 530 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 EML1O00423 815 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 FAM157BP0CG42 384 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 CSB-PGBD3P0DP91 1061 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 BMP4P12644 408 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 TXLNAP40222 546 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 GTF2IP78347 998 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 CLDN10P78369 228 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 GRIN2CQ14957 1233 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 SH3PXD2AQ5TCZ1 1133 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 PGBD3Q8N328 593 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD44-212ENST00000524922 BTBD6Q96KE9 485 aa4.16□□□□□ -1.74
CD44-212ENST00000524922 DCDC2BA2VCK2 349 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 ATXN7O15265 892 aaPredicted RBP4.15□□□□□ -1.75
CD44-212ENST00000524922 LZTS3O60299 673 aaPredicted RBP4.15□□□□□ -1.75
CD44-212ENST00000524922 SKIP12755 728 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 CD33P20138 364 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 TEAD4Q15561 434 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 FIGNL1Q6PIW4 674 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 PLEKHM2Q8IWE5 1019 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 DEPDC4Q8N2C3 294 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 FNBP4Q8N3X1 1017 aaPredicted RBP4.15□□□□□ -1.75
CD44-212ENST00000524922 AVENQ9NQS1 362 aaPredicted RBP4.15□□□□□ -1.75
CD44-212ENST00000524922 PARP3Q9Y6F1 533 aa4.15□□□□□ -1.75
CD44-212ENST00000524922 NEURL1BA8MQ27 555 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 MSTNO14793 375 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 ADAM23O75077 832 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 GTF2E1P29083 439 aaPredicted RBP4.14□□□□□ -1.75
CD44-212ENST00000524922 COL9A3Q14050 684 aaPredicted RBP4.14□□□□□ -1.75
CD44-212ENST00000524922 EML3Q32P44 896 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 ZNF468Q5VIY5 522 aaPredicted RBP4.14□□□□□ -1.75
CD44-212ENST00000524922 PODNQ7Z5L7 613 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 TNS4Q8IZW8 715 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 L3MBTL2Q969R5 705 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 AIDAQ96BJ3 306 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 MKL2Q9ULH7 1088 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 NOD1Q9Y239 953 aa4.14□□□□□ -1.75
CD44-212ENST00000524922 C21orf2O43822 256 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 ITGB7P26010 798 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 NOS2P35228 1153 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 HIRAP54198 1017 aaPredicted RBP4.13□□□□□ -1.75
CD44-212ENST00000524922 NBPF1Q3BBV0 1214 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 TBCELQ5QJ74 424 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 SLC9A9Q8IVB4 645 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 TRIM11Q96F44 468 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 CABP1Q9NZU7 370 aa4.13□□□□□ -1.75
CD44-212ENST00000524922 USP17L3A6NCW0 530 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 USP17L4A6NCW7 530 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 BACH1O14867 736 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 ADH6P28332 368 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 LAMC2Q13753 1193 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 ARSJQ5FYB0 599 aaPredicted RBP4.12□□□□□ -1.75
CD44-212ENST00000524922 USP17L2Q6R6M4 530 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 CHSY3Q70JA7 882 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 USP17L1Q7RTZ2 530 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 ALYREFQ86V81 257 aaKnown RBP4.12□□□□□ -1.75
CD44-212ENST00000524922 SIX5Q8N196 739 aa4.12□□□□□ -1.75
CD44-212ENST00000524922 M0R2N6 131 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 GNB5O14775 395 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 KHNYNO15037 678 aaKnown RBP4.11□□□□□ -1.75
CD44-212ENST00000524922 ATP9BO43861 1147 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 TATP17735 454 aaPredicted RBP4.11□□□□□ -1.75
CD44-212ENST00000524922 CHRNA4P43681 627 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 PCBP4P57723 403 aaKnown RBP4.11□□□□□ -1.75
CD44-212ENST00000524922 SFSWAPQ12872 951 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms