RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 SIRT2Q8IXJ6 389 aa14.88□□□□□ -0.03
CSTF3-205ENST00000524775 FMNL2Q96PY5 1086 aa14.88□□□□□ -0.03
CSTF3-205ENST00000524775 DDX21Q9NR30 783 aaKnown RBP eCLIP14.88□□□□□ -0.03
CSTF3-205ENST00000524775 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
CSTF3-205ENST00000524775 USP16Q9Y5T5 823 aa14.88□□□□□ -0.03
CSTF3-205ENST00000524775 BCL9O00512 1426 aa14.87□□□□□ -0.03
CSTF3-205ENST00000524775 SNRPA1P09661 255 aaKnown RBP14.87□□□□□ -0.03
CSTF3-205ENST00000524775 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
CSTF3-205ENST00000524775 PIGBQ92521 554 aa14.87□□□□□ -0.03
CSTF3-205ENST00000524775 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
CSTF3-205ENST00000524775 RWDD1Q9H446 243 aaPredicted RBP14.87□□□□□ -0.03
CSTF3-205ENST00000524775 NUP188Q5SRE5 1749 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 ARFGEF2Q9Y6D5 1785 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 ATP10DQ9P241 1426 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 FKBP5Q13451 457 aaPredicted RBP14.86□□□□□ -0.03
CSTF3-205ENST00000524775 MARCH10Q8NA82 808 aaPredicted RBP14.86□□□□□ -0.03
CSTF3-205ENST00000524775 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 C8orf37Q96NL8 207 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 TJP1Q07157 1748 aa14.86□□□□□ -0.03
CSTF3-205ENST00000524775 SMC5Q8IY18 1101 aa14.85□□□□□ -0.03
CSTF3-205ENST00000524775 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
CSTF3-205ENST00000524775 MEIS3Q99687 375 aa14.85□□□□□ -0.03
CSTF3-205ENST00000524775 ATG3Q9NT62 314 aa14.85□□□□□ -0.03
CSTF3-205ENST00000524775 HYPKQ9NX55 129 aa14.85□□□□□ -0.03
CSTF3-205ENST00000524775 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
CSTF3-205ENST00000524775 TMOD3Q9NYL9 352 aa14.84□□□□□ -0.03
CSTF3-205ENST00000524775 AFDNP55196 1824 aaKnown RBP14.84□□□□□ -0.03
CSTF3-205ENST00000524775 SBF2Q86WG5 1849 aa14.84□□□□□ -0.03
CSTF3-205ENST00000524775 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
CSTF3-205ENST00000524775 PI4KAP2A4QPH2 592 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 DDB1Q16531 1140 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 BEND3Q5T5X7 828 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 SLC4A10Q6U841 1118 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 PI4KAP1Q8N8J0 262 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
CSTF3-205ENST00000524775 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 NBPF10Q6P3W6 841 aaKnown RBP14.82□□□□□ -0.04
CSTF3-205ENST00000524775 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 ANKRD44Q8N8A2 993 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 DNAAF4Q8WXU2 420 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 USP44Q9H0E7 712 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 PDZRN3Q9UPQ7 1066 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
CSTF3-205ENST00000524775 USP21Q9UK80 565 aa14.81□□□□□ -0.04
CSTF3-205ENST00000524775 IBTKQ9P2D0 1353 aaPredicted RBP14.81□□□□□ -0.04
CSTF3-205ENST00000524775 ATRNO75882 1429 aa14.81□□□□□ -0.04
CSTF3-205ENST00000524775 ZNF831Q5JPB2 1677 aa14.81□□□□□ -0.04
CSTF3-205ENST00000524775 RREB1Q92766 1687 aa14.81□□□□□ -0.04
CSTF3-205ENST00000524775 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
CSTF3-205ENST00000524775 VSIG10Q8N0Z9 540 aa14.8□□□□□ -0.04
CSTF3-205ENST00000524775 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
CSTF3-205ENST00000524775 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
CSTF3-205ENST00000524775 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
CSTF3-205ENST00000524775 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
CSTF3-205ENST00000524775 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
CSTF3-205ENST00000524775 XAGE3Q8WTP9 111 aa14.79□□□□□ -0.04
CSTF3-205ENST00000524775 MAP3K2Q9Y2U5 619 aa14.79□□□□□ -0.04
CSTF3-205ENST00000524775 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
CSTF3-205ENST00000524775 AFF2P51816 1311 aa14.78□□□□□ -0.04
CSTF3-205ENST00000524775 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
CSTF3-205ENST00000524775 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
CSTF3-205ENST00000524775 COPS6Q7L5N1 327 aa14.78□□□□□ -0.04
CSTF3-205ENST00000524775 SRCIN1Q9C0H9 1055 aa14.78□□□□□ -0.04
CSTF3-205ENST00000524775 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
CSTF3-205ENST00000524775 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
CSTF3-205ENST00000524775 ALDH1L1O75891 902 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 A1BGP04217 495 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 GNAI3P08754 354 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 MYL6BP14649 208 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 PDE4AP27815 886 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
CSTF3-205ENST00000524775 NUCB1Q02818 461 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 DCTPP1Q9H773 170 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 BTAF1O14981 1849 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 NHSQ6T4R5 1651 aa14.77□□□□□ -0.05
CSTF3-205ENST00000524775 NUP98P52948 1817 aa14.76□□□□□ -0.05
CSTF3-205ENST00000524775 GNAI2P04899 355 aa14.76□□□□□ -0.05
CSTF3-205ENST00000524775 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
CSTF3-205ENST00000524775 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
CSTF3-205ENST00000524775 UTYO14607 1347 aa14.75□□□□□ -0.05
CSTF3-205ENST00000524775 ATP8B2P98198 1209 aa14.75□□□□□ -0.05
CSTF3-205ENST00000524775 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
CSTF3-205ENST00000524775 LINS1Q8NG48 757 aa14.75□□□□□ -0.05
CSTF3-205ENST00000524775 GCC1Q96CN9 775 aa14.75□□□□□ -0.05
CSTF3-205ENST00000524775 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
CSTF3-205ENST00000524775 METTL22Q9BUU2 404 aaPredicted RBP14.75□□□□□ -0.05
CSTF3-205ENST00000524775 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
CSTF3-205ENST00000524775 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
CSTF3-205ENST00000524775 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
CSTF3-205ENST00000524775 ANKRD13DQ6ZTN6 518 aa14.74□□□□□ -0.05
CSTF3-205ENST00000524775 NBPF7P0C2Y1 421 aaPredicted RBP14.73□□□□□ -0.05
CSTF3-205ENST00000524775 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
CSTF3-205ENST00000524775 RGS3P49796 1198 aa14.73□□□□□ -0.05
CSTF3-205ENST00000524775 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
CSTF3-205ENST00000524775 TTLL7Q6ZT98 887 aa14.73□□□□□ -0.05
CSTF3-205ENST00000524775 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
CSTF3-205ENST00000524775 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
CSTF3-205ENST00000524775 LRRFIP2Q9Y608 721 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms