RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 NEMFO60524 1076 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 KIF4BQ2VIQ3 1234 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
CTNND1-210ENST00000524630 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 TTC22Q5TAA0 569 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 SNW1Q13573 536 aaKnown RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 ZNF397Q8NF99 534 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
CTNND1-210ENST00000524630 LMAN1P49257 510 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 PTPRCP08575 1304 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 STX6O43752 255 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 NUCB1Q02818 461 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 TMC6Q7Z403 805 aa11.8□□□□□ -0.52
CTNND1-210ENST00000524630 NOLC1Q14978 699 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNND1-210ENST00000524630 STX1AQ16623 288 aa11.79□□□□□ -0.52
CTNND1-210ENST00000524630 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
CTNND1-210ENST00000524630 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
CTNND1-210ENST00000524630 DDX19AQ9NUU7 478 aaKnown RBP11.79□□□□□ -0.52
CTNND1-210ENST00000524630 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
CTNND1-210ENST00000524630 FAM107BQ9H098 131 aa11.79□□□□□ -0.52
CTNND1-210ENST00000524630 IDH1O75874 414 aaKnown RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 GSDMDP57764 484 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 TAF4BQ92750 862 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 ASXL1Q8IXJ9 1541 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 GTF2A1P52655 376 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 KLHL10Q6JEL2 608 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 IPO4Q8TEX9 1081 aaKnown RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 MYD88Q99836 296 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 CCDC94Q9BW85 323 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 UBE2HP62256 183 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
CTNND1-210ENST00000524630 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-210ENST00000524630 BCCIPQ9P287 314 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■■□ 21.2
CTNND1-210ENST00000524630 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.521e-7■■■■■ 26.8
CTNND1-210ENST00000524630 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.52
CTNND1-210ENST00000524630 GTPBP4Q9BZE4 634 aaKnown RBP11.77□□□□□ -0.52
CTNND1-210ENST00000524630 POTEB2H3BUK9 544 aa11.77□□□□□ -0.52
CTNND1-210ENST00000524630 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.52
CTNND1-210ENST00000524630 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.52
CTNND1-210ENST00000524630 GBP2P32456 591 aaPredicted RBP11.77□□□□□ -0.53
CTNND1-210ENST00000524630 SPA17Q15506 151 aa11.77□□□□□ -0.53
CTNND1-210ENST00000524630 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
CTNND1-210ENST00000524630 CTR9Q6PD62 1173 aa11.77□□□□□ -0.53
CTNND1-210ENST00000524630 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.53
CTNND1-210ENST00000524630 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 WAPLQ7Z5K2 1190 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 HDAC1Q13547 482 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 NME9Q86XW9 330 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 EVI5LQ96CN4 794 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 NSD2O96028 1365 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 CPLX3Q8WVH0 158 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-210ENST00000524630 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
CTNND1-210ENST00000524630 CCDC171Q6TFL3 1326 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 METTL24Q5JXM2 366 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 CCDC113Q9H0I3 377 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 PROSER2Q86WR7 435 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 USHBP1Q8N6Y0 703 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-210ENST00000524630 TMX3Q96JJ7 454 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
CTNND1-210ENST00000524630 PLB1Q6P1J6 1458 aa11.74□□□□□ -0.53
CTNND1-210ENST00000524630 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
CTNND1-210ENST00000524630 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
CTNND1-210ENST00000524630 BIN1O00499 593 aa11.74□□□□□ -0.53
CTNND1-210ENST00000524630 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-210ENST00000524630 RBM25P49756 843 aaKnown RBP11.74□□□□□ -0.53
CTNND1-210ENST00000524630 FKBP15Q5T1M5 1219 aa11.74□□□□□ -0.53
CTNND1-210ENST00000524630 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
CTNND1-210ENST00000524630 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms