RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TEX13AQ9BXU3 409 aaPredicted RBP22.94■■□□□ 1.26
PACSIN3-202ENST00000524509 WWC3Q9ULE0 1092 aa22.94■■□□□ 1.26
PACSIN3-202ENST00000524509 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
PACSIN3-202ENST00000524509 RBM42Q9BTD8 480 aaKnown RBP22.93■■□□□ 1.26
PACSIN3-202ENST00000524509 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
PACSIN3-202ENST00000524509 FMNL2Q96PY5 1086 aa22.92■■□□□ 1.26
PACSIN3-202ENST00000524509 SMIM5Q71RC9 77 aa22.91■■□□□ 1.26
PACSIN3-202ENST00000524509 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
PACSIN3-202ENST00000524509 APLP1P51693 650 aa22.9■■□□□ 1.26
PACSIN3-202ENST00000524509 GNAI1P63096 354 aa22.89■■□□□ 1.25
PACSIN3-202ENST00000524509 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
PACSIN3-202ENST00000524509 LINC00116Q8NCU8 138 aa22.89■■□□□ 1.25
PACSIN3-202ENST00000524509 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
PACSIN3-202ENST00000524509 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.25
PACSIN3-202ENST00000524509 KIF13BQ9NQT8 1826 aa22.88■■□□□ 1.25
PACSIN3-202ENST00000524509 WDR63Q8IWG1 891 aa22.88■■□□□ 1.25
PACSIN3-202ENST00000524509 WWC1Q8IX03 1113 aa22.88■■□□□ 1.25
PACSIN3-202ENST00000524509 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
PACSIN3-202ENST00000524509 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
PACSIN3-202ENST00000524509 IL16Q14005 1332 aa22.87■■□□□ 1.25
PACSIN3-202ENST00000524509 STARD3NLO95772 234 aa22.87■■□□□ 1.25
PACSIN3-202ENST00000524509 TOMM70O94826 608 aa22.86■■□□□ 1.25
PACSIN3-202ENST00000524509 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
PACSIN3-202ENST00000524509 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
PACSIN3-202ENST00000524509 CHL1O00533 1208 aa22.85■■□□□ 1.25
PACSIN3-202ENST00000524509 GNPATO15228 680 aa22.85■■□□□ 1.25
PACSIN3-202ENST00000524509 RC3H1Q5TC82 1133 aaKnown RBP22.85■■□□□ 1.25
PACSIN3-202ENST00000524509 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
PACSIN3-202ENST00000524509 MMP10P09238 476 aa22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 SNRPA1P09661 255 aaKnown RBP22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 TGFB2P61812 414 aa22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 DNAJC5GQ8N7S2 189 aa22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 ZNF496Q96IT1 587 aaPredicted RBP22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 HEG1Q9ULI3 1381 aa22.84■■□□□ 1.25
PACSIN3-202ENST00000524509 ITPK1Q13572 414 aa22.83■■□□□ 1.25
PACSIN3-202ENST00000524509 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
PACSIN3-202ENST00000524509 N4BP2Q86UW6 1770 aaPredicted RBP22.81■■□□□ 1.24
PACSIN3-202ENST00000524509 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
PACSIN3-202ENST00000524509 CNTNAP4Q9C0A0 1308 aa22.81■■□□□ 1.24
PACSIN3-202ENST00000524509 ZNF831Q5JPB2 1677 aa22.81■■□□□ 1.24
PACSIN3-202ENST00000524509 ZNF853P0CG23 659 aa22.8■■□□□ 1.24
PACSIN3-202ENST00000524509 EIF4A1P60842 406 aaKnown RBP22.8■■□□□ 1.24
PACSIN3-202ENST00000524509 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
PACSIN3-202ENST00000524509 NPM2Q86SE8 214 aaKnown RBP22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 NLGN1Q8N2Q7 840 aa22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 BCS1LQ9Y276 419 aa22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 C10orf71Q711Q0 1435 aa22.79■■□□□ 1.24
PACSIN3-202ENST00000524509 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
PACSIN3-202ENST00000524509 KCPQ6ZWJ8 1503 aa22.78■■□□□ 1.24
PACSIN3-202ENST00000524509 HOXB7P09629 217 aa22.78■■□□□ 1.24
PACSIN3-202ENST00000524509 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
PACSIN3-202ENST00000524509 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
PACSIN3-202ENST00000524509 A0A0G2JLW4 131 aa22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 KCNQ3O43525 872 aa22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 ADRA2BP18089 450 aa22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 DNAJC10Q8IXB1 793 aa22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 VIRMAQ69YN4 1812 aaKnown RBP22.77■■□□□ 1.24
PACSIN3-202ENST00000524509 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
PACSIN3-202ENST00000524509 ARHGAP27Q6ZUM4 889 aa22.76■■□□□ 1.23
PACSIN3-202ENST00000524509 NMRK2Q9NPI5 230 aa22.76■■□□□ 1.23
PACSIN3-202ENST00000524509 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
PACSIN3-202ENST00000524509 CCDC87Q9NVE4 849 aa22.76■■□□□ 1.23
PACSIN3-202ENST00000524509 BRCA1P38398 1863 aaKnown RBP22.75■■□□□ 1.23
PACSIN3-202ENST00000524509 WDR90Q96KV7 1748 aa22.75■■□□□ 1.23
PACSIN3-202ENST00000524509 CRKLP46109 303 aaKnown RBP22.75■■□□□ 1.23
PACSIN3-202ENST00000524509 GOLGA2Q08379 1002 aa22.75■■□□□ 1.23
PACSIN3-202ENST00000524509 C4AP0C0L4 1744 aa22.74■■□□□ 1.23
PACSIN3-202ENST00000524509 RPS6KA4O75676 772 aa22.74■■□□□ 1.23
PACSIN3-202ENST00000524509 RBM46Q8TBY0 533 aaKnown RBP22.74■■□□□ 1.23
PACSIN3-202ENST00000524509 E9PSI1 815 aa22.73■■□□□ 1.23
PACSIN3-202ENST00000524509 DPEP1P16444 411 aa22.73■■□□□ 1.23
PACSIN3-202ENST00000524509 UBR2Q8IWV8 1755 aa22.72■■□□□ 1.23
PACSIN3-202ENST00000524509 A0A087WZG4 1122 aa22.72■■□□□ 1.23
PACSIN3-202ENST00000524509 ERBB4Q15303 1308 aa22.72■■□□□ 1.23
PACSIN3-202ENST00000524509 ZNF521Q96K83 1311 aa22.72■■□□□ 1.23
PACSIN3-202ENST00000524509 ARFGEF1Q9Y6D6 1849 aa22.71■■□□□ 1.23
PACSIN3-202ENST00000524509 GYS1P13807 737 aa22.71■■□□□ 1.23
PACSIN3-202ENST00000524509 HNRNPUQ00839 825 aaKnown RBP eCLIP22.71■■□□□ 1.23
PACSIN3-202ENST00000524509 ARHGEF1Q92888 912 aaKnown RBP22.71■■□□□ 1.23
PACSIN3-202ENST00000524509 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
PACSIN3-202ENST00000524509 INTS5Q6P9B9 1019 aaKnown RBP22.7■■□□□ 1.22
PACSIN3-202ENST00000524509 USP16Q9Y5T5 823 aa22.7■■□□□ 1.22
PACSIN3-202ENST00000524509 KCNA3P22001 575 aa22.69■■□□□ 1.22
PACSIN3-202ENST00000524509 RFC4P35249 363 aa22.69■■□□□ 1.22
PACSIN3-202ENST00000524509 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
PACSIN3-202ENST00000524509 C9orf131Q5VYM1 1079 aa22.69■■□□□ 1.22
PACSIN3-202ENST00000524509 PARP3Q9Y6F1 533 aa22.69■■□□□ 1.22
PACSIN3-202ENST00000524509 KDM3BQ7LBC6 1761 aa22.68■■□□□ 1.22
PACSIN3-202ENST00000524509 FSTL1Q12841 308 aa22.68■■□□□ 1.22
PACSIN3-202ENST00000524509 C16orf71Q8IYS4 520 aaPredicted RBP22.68■■□□□ 1.22
PACSIN3-202ENST00000524509 JMYQ8N9B5 988 aa22.68■■□□□ 1.22
PACSIN3-202ENST00000524509 KLRG1Q96E93 195 aa22.68■■□□□ 1.22
PACSIN3-202ENST00000524509 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
PACSIN3-202ENST00000524509 CANXP27824 592 aaKnown RBP22.66■■□□□ 1.22
PACSIN3-202ENST00000524509 PIM2Q9P1W9 311 aa22.66■■□□□ 1.22
PACSIN3-202ENST00000524509 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms