RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 FOXO3O43524 673 aa8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 TXLNAP40222 546 aa8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
CTNNA1-238ENST00000523298 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 FIGNL2A6NMB9 653 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 AXIN1O15169 862 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 NOS2P35228 1153 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 PHKA2P46019 1235 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 POU4F2Q12837 409 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 TEAD4Q15561 434 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 B4GALNT3Q6L9W6 998 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
CTNNA1-238ENST00000523298 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 SOBPA7XYQ1 873 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 RHOQP17081 205 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 GPC1P35052 558 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 COX20Q5RI15 118 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 PRICKLE2Q7Z3G6 844 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 STAG2Q8N3U4 1231 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
CTNNA1-238ENST00000523298 SPATA31C2B4DYI2 1134 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 NOM1Q5C9Z4 860 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 SLC27A3Q5K4L6 730 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
CTNNA1-238ENST00000523298 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 ABL1P00519 1130 aa8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 SND1Q7KZF4 910 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 CCER1Q8TC90 406 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 COL26A1Q96A83 441 aa8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-238ENST00000523298 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-238ENST00000523298 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
CTNNA1-238ENST00000523298 NIFKQ9BYG3 293 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-238ENST00000523298 ZNF232Q9UNY5 417 aa8.26□□□□□ -1.09
CTNNA1-238ENST00000523298 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 ZBTB39O15060 712 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 ICMTO60725 284 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 UPP2O95045 317 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 ATP4AP20648 1035 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
CTNNA1-238ENST00000523298 H3BRB1 525 aa8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 SCARF1Q14162 830 aa8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 HELQQ8TDG4 1101 aa8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 TUT1Q9H6E5 874 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 KLK14Q9P0G3 267 aa8.24□□□□□ -1.09
CTNNA1-238ENST00000523298 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-238ENST00000523298 ARHGAP4P98171 946 aa8.23□□□□□ -1.09
CTNNA1-238ENST00000523298 C16orf46Q6P387 395 aa8.23□□□□□ -1.09
CTNNA1-238ENST00000523298 MYO19Q96H55 970 aa8.23□□□□□ -1.09
CTNNA1-238ENST00000523298 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 THBS1P07996 1170 aa8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 MPSTP25325 297 aa8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 GNASQ5JWF2 1037 aa8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 ZNF280CQ8ND82 737 aa8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 EGFL7Q9UHF1 273 aa8.22□□□□□ -1.09
CTNNA1-238ENST00000523298 POTECB2RU33 542 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 NPR3P17342 541 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 MFAP1P55081 439 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 DGKZQ13574 1117 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 TMCO4Q5TGY1 634 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 ETFBKMTQ8IXQ9 262 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 VTI1AQ96AJ9 217 aa8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 GMPR2Q9P2T1 348 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-238ENST00000523298 FKBP4Q02790 459 aaKnown RBP eCLIP8.2□□□□□ -1.1
CTNNA1-238ENST00000523298 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
CTNNA1-238ENST00000523298 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
CTNNA1-238ENST00000523298 HSH2DQ96JZ2 352 aa8.2□□□□□ -1.1
CTNNA1-238ENST00000523298 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-238ENST00000523298 MSX1P28360 303 aa8.19□□□□□ -1.1
CTNNA1-238ENST00000523298 RTN1Q16799 776 aa8.19□□□□□ -1.1
CTNNA1-238ENST00000523298 DNAJC14Q6Y2X3 702 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 GLYCTKQ8IVS8 523 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 ZIC5Q96T25 663 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 GPAMQ9HCL2 828 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 CUEDC1Q9NWM3 386 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
CTNNA1-238ENST00000523298 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-238ENST00000523298 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
CTNNA1-238ENST00000523298 C1orf53Q5VUE5 145 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms