RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 COL15A1P39059 1388 aa12.73□□□□□ -0.37
SDC2-207ENST00000522911 APLP1P51693 650 aa12.73□□□□□ -0.37
SDC2-207ENST00000522911 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
SDC2-207ENST00000522911 IFFO2Q5TF58 517 aa12.73□□□□□ -0.37
SDC2-207ENST00000522911 UBR2Q8IWV8 1755 aa12.73□□□□□ -0.37
SDC2-207ENST00000522911 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
SDC2-207ENST00000522911 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
SDC2-207ENST00000522911 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
SDC2-207ENST00000522911 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
SDC2-207ENST00000522911 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
SDC2-207ENST00000522911 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 STARD3NLO95772 234 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 HMOX1P09601 288 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
SDC2-207ENST00000522911 FSTL1Q12841 308 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 NFIXQ14938 502 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
SDC2-207ENST00000522911 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
SDC2-207ENST00000522911 A0A087WZG4 1122 aa12.69□□□□□ -0.38
SDC2-207ENST00000522911 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
SDC2-207ENST00000522911 PCNTO95613 3336 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 CHRNA5P30532 468 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 ZNF790Q6PG37 636 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
SDC2-207ENST00000522911 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
SDC2-207ENST00000522911 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
SDC2-207ENST00000522911 SERPINB2P05120 415 aa12.67□□□□□ -0.38
SDC2-207ENST00000522911 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
SDC2-207ENST00000522911 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
SDC2-207ENST00000522911 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
SDC2-207ENST00000522911 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
SDC2-207ENST00000522911 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
SDC2-207ENST00000522911 SBF1O95248 1867 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 RGL2O15211 777 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 LMNB1P20700 586 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
SDC2-207ENST00000522911 TEFQ10587 303 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
SDC2-207ENST00000522911 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
SDC2-207ENST00000522911 RNF181Q9P0P0 153 aa12.66□□□□□ -0.38
SDC2-207ENST00000522911 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 H0YIN7 160 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
SDC2-207ENST00000522911 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 BRIP1Q9BX63 1249 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
SDC2-207ENST00000522911 LTBP3Q9NS15 1303 aa12.63□□□□□ -0.39
SDC2-207ENST00000522911 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
SDC2-207ENST00000522911 PDE6BP35913 854 aa12.63□□□□□ -0.39
SDC2-207ENST00000522911 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
SDC2-207ENST00000522911 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
SDC2-207ENST00000522911 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
SDC2-207ENST00000522911 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
SDC2-207ENST00000522911 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
SDC2-207ENST00000522911 NFKBIEO00221 500 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SDC2-207ENST00000522911 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
SDC2-207ENST00000522911 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
SDC2-207ENST00000522911 PRELPP51888 382 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
SDC2-207ENST00000522911 RASSF7Q02833 373 aa12.6□□□□□ -0.39
SDC2-207ENST00000522911 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
SDC2-207ENST00000522911 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
SDC2-207ENST00000522911 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
SDC2-207ENST00000522911 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
SDC2-207ENST00000522911 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
SDC2-207ENST00000522911 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
SDC2-207ENST00000522911 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
SDC2-207ENST00000522911 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
SDC2-207ENST00000522911 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
SDC2-207ENST00000522911 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
SDC2-207ENST00000522911 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
SDC2-207ENST00000522911 CNKSR1Q969H4 720 aa12.58□□□□□ -0.4
SDC2-207ENST00000522911 BCORQ6W2J9 1755 aa12.58□□□□□ -0.4
SDC2-207ENST00000522911 FER1L6Q2WGJ9 1857 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 A1BGP04217 495 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
SDC2-207ENST00000522911 SRGNP10124 158 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 TBC1D2BQ9UPU7 963 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
SDC2-207ENST00000522911 POTECB2RU33 542 aa12.56□□□□□ -0.4
SDC2-207ENST00000522911 ST5P78524 1137 aa12.56□□□□□ -0.4
SDC2-207ENST00000522911 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
SDC2-207ENST00000522911 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
SDC2-207ENST00000522911 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms