RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 DDR1Q08345 913 aa24.87■■□□□ 1.57
SPIDR-220ENST00000522900 RALBP1Q15311 655 aa24.87■■□□□ 1.57
SPIDR-220ENST00000522900 UBR2Q8IWV8 1755 aa24.87■■□□□ 1.57
SPIDR-220ENST00000522900 FMNL2Q96PY5 1086 aa24.86■■□□□ 1.57
SPIDR-220ENST00000522900 SIPA1L3O60292 1781 aaPredicted RBP24.85■■□□□ 1.57
SPIDR-220ENST00000522900 COL15A1P39059 1388 aa24.85■■□□□ 1.57
SPIDR-220ENST00000522900 A0A0G2JLW4 131 aa24.85■■□□□ 1.57
SPIDR-220ENST00000522900 TM4SF1P30408 202 aa24.85■■□□□ 1.57
SPIDR-220ENST00000522900 NARFQ9UHQ1 456 aa24.85■■□□□ 1.57
SPIDR-220ENST00000522900 HTATSF1O43719 755 aaKnown RBP24.84■■□□□ 1.57
SPIDR-220ENST00000522900 TEX13AQ9BXU3 409 aaPredicted RBP24.84■■□□□ 1.57
SPIDR-220ENST00000522900 BCL2L12Q9HB09 334 aa24.84■■□□□ 1.57
SPIDR-220ENST00000522900 C10orf71Q711Q0 1435 aa24.84■■□□□ 1.57
SPIDR-220ENST00000522900 PXDNLA1KZ92 1463 aa24.83■■□□□ 1.57
SPIDR-220ENST00000522900 EIF5P55010 431 aaKnown RBP24.83■■□□□ 1.57
SPIDR-220ENST00000522900 TGFB2P61812 414 aa24.83■■□□□ 1.57
SPIDR-220ENST00000522900 PRAMEF22A3QJZ6 481 aa24.82■■□□□ 1.56
SPIDR-220ENST00000522900 POLRMTO00411 1230 aaKnown RBP24.82■■□□□ 1.56
SPIDR-220ENST00000522900 A1BGP04217 495 aa24.82■■□□□ 1.56
SPIDR-220ENST00000522900 CHD4Q14839 1912 aa24.81■■□□□ 1.56
SPIDR-220ENST00000522900 DPEP1P16444 411 aa24.81■■□□□ 1.56
SPIDR-220ENST00000522900 MIS18AQ9NYP9 233 aa24.81■■□□□ 1.56
SPIDR-220ENST00000522900 USP16Q9Y5T5 823 aa24.81■■□□□ 1.56
SPIDR-220ENST00000522900 NEFMP07197 916 aa24.8■■□□□ 1.56
SPIDR-220ENST00000522900 NFIXQ14938 502 aa24.8■■□□□ 1.56
SPIDR-220ENST00000522900 KCNA3P22001 575 aa24.79■■□□□ 1.56
SPIDR-220ENST00000522900 TAF7Q15545 349 aaPredicted RBP24.79■■□□□ 1.56
SPIDR-220ENST00000522900 NFE2L2Q16236 605 aa24.79■■□□□ 1.56
SPIDR-220ENST00000522900 THUMPD2Q9BTF0 503 aaKnown RBP24.78■■□□□ 1.56
SPIDR-220ENST00000522900 TBC1D2BQ9UPU7 963 aa24.78■■□□□ 1.56
SPIDR-220ENST00000522900 ZNF330Q9Y3S2 320 aaPredicted RBP24.78■■□□□ 1.56
SPIDR-220ENST00000522900 PIP4K2AP48426 406 aaPredicted RBP24.77■■□□□ 1.56
SPIDR-220ENST00000522900 KIAA1551Q9HCM1 1747 aa24.77■■□□□ 1.56
SPIDR-220ENST00000522900 KIF13BQ9NQT8 1826 aa24.77■■□□□ 1.56
SPIDR-220ENST00000522900 IL6STP40189 918 aaPredicted RBP24.76■■□□□ 1.55
SPIDR-220ENST00000522900 BCS1LQ9Y276 419 aa24.76■■□□□ 1.55
SPIDR-220ENST00000522900 MYBBP1AQ9BQG0 1328 aaKnown RBP24.76■■□□□ 1.55
SPIDR-220ENST00000522900 A0A087WZG4 1122 aa24.75■■□□□ 1.55
SPIDR-220ENST00000522900 SNRPA1P09661 255 aaKnown RBP24.75■■□□□ 1.55
SPIDR-220ENST00000522900 BICDL1Q6ZP65 573 aa24.75■■□□□ 1.55
SPIDR-220ENST00000522900 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
SPIDR-220ENST00000522900 N4BP2Q86UW6 1770 aaPredicted RBP24.75■■□□□ 1.55
SPIDR-220ENST00000522900 MAPK8IP3Q9UPT6 1336 aa24.74■■□□□ 1.55
SPIDR-220ENST00000522900 SERPINB2P05120 415 aa24.73■■□□□ 1.55
SPIDR-220ENST00000522900 CHRNA5P30532 468 aa24.73■■□□□ 1.55
SPIDR-220ENST00000522900 TBC1D9BQ66K14 1250 aa24.72■■□□□ 1.55
SPIDR-220ENST00000522900 CAMTA2O94983 1202 aa24.7■■□□□ 1.54
SPIDR-220ENST00000522900 NBPF26B4DH59 902 aa24.69■■□□□ 1.54
SPIDR-220ENST00000522900 RIPK4P57078 832 aa24.69■■□□□ 1.54
SPIDR-220ENST00000522900 NBPF10Q6P3W6 841 aaKnown RBP24.69■■□□□ 1.54
SPIDR-220ENST00000522900 NBPF15Q8N660 670 aa24.69■■□□□ 1.54
SPIDR-220ENST00000522900 PRKRIP1Q9H875 184 aaPredicted RBP24.69■■□□□ 1.54
SPIDR-220ENST00000522900 PIM2Q9P1W9 311 aa24.69■■□□□ 1.54
SPIDR-220ENST00000522900 DZIP3Q86Y13 1208 aaKnown RBP24.68■■□□□ 1.54
SPIDR-220ENST00000522900 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
SPIDR-220ENST00000522900 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
SPIDR-220ENST00000522900 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
SPIDR-220ENST00000522900 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
SPIDR-220ENST00000522900 EIF4A1P60842 406 aaKnown RBP24.67■■□□□ 1.54
SPIDR-220ENST00000522900 ARHGAP27Q6ZUM4 889 aa24.67■■□□□ 1.54
SPIDR-220ENST00000522900 NPM2Q86SE8 214 aaKnown RBP24.67■■□□□ 1.54
SPIDR-220ENST00000522900 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
SPIDR-220ENST00000522900 GIGYF1O75420 1035 aaPredicted RBP24.65■■□□□ 1.54
SPIDR-220ENST00000522900 DALRD3Q5D0E6 543 aaKnown RBP24.65■■□□□ 1.54
SPIDR-220ENST00000522900 CCDC24Q8N4L8 307 aa24.65■■□□□ 1.54
SPIDR-220ENST00000522900 ATP10DQ9P241 1426 aa24.65■■□□□ 1.54
SPIDR-220ENST00000522900 ADAMTS8Q9UP79 889 aa24.65■■□□□ 1.54
SPIDR-220ENST00000522900 CARMIL3Q8ND23 1372 aa24.65■■□□□ 1.54
SPIDR-220ENST00000522900 ADCY9O60503 1353 aa24.64■■□□□ 1.53
SPIDR-220ENST00000522900 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
SPIDR-220ENST00000522900 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
SPIDR-220ENST00000522900 NRXN2Q9P2S2 1712 aa24.62■■□□□ 1.53
SPIDR-220ENST00000522900 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.53
SPIDR-220ENST00000522900 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
SPIDR-220ENST00000522900 PRR5LQ6MZQ0 368 aa24.61■■□□□ 1.53
SPIDR-220ENST00000522900 ZNF526Q8TF50 670 aaPredicted RBP24.61■■□□□ 1.53
SPIDR-220ENST00000522900 SETDB2Q96T68 719 aa24.61■■□□□ 1.53
SPIDR-220ENST00000522900 SCN7AQ01118 1682 aa24.6■■□□□ 1.53
SPIDR-220ENST00000522900 C2CD5Q86YS7 1000 aa24.6■■□□□ 1.53
SPIDR-220ENST00000522900 RUNDC1Q96C34 613 aa24.6■■□□□ 1.53
SPIDR-220ENST00000522900 TSPYL4Q9UJ04 414 aa24.6■■□□□ 1.53
SPIDR-220ENST00000522900 BRCA1P38398 1863 aaKnown RBP24.6■■□□□ 1.53
SPIDR-220ENST00000522900 NGEFQ8N5V2 710 aa24.59■■□□□ 1.53
SPIDR-220ENST00000522900 KDM3BQ7LBC6 1761 aa24.58■■□□□ 1.53
SPIDR-220ENST00000522900 C1QTNF8P60827 252 aa24.58■■□□□ 1.53
SPIDR-220ENST00000522900 CLEC4GQ6UXB4 293 aa24.58■■□□□ 1.53
SPIDR-220ENST00000522900 HLFQ16534 295 aa24.57■■□□□ 1.52
SPIDR-220ENST00000522900 BRIP1Q9BX63 1249 aa24.57■■□□□ 1.52
SPIDR-220ENST00000522900 TRIM35Q9UPQ4 493 aa24.57■■□□□ 1.52
SPIDR-220ENST00000522900 H0YIN7 160 aa24.56■■□□□ 1.52
SPIDR-220ENST00000522900 LMOD3Q0VAK6 560 aa24.56■■□□□ 1.52
SPIDR-220ENST00000522900 GPBP1L1Q9HC44 474 aaPredicted RBP24.56■■□□□ 1.52
SPIDR-220ENST00000522900 TTLL6Q8N841 843 aa24.55■■□□□ 1.52
SPIDR-220ENST00000522900 CNBD1Q8NA66 436 aa24.55■■□□□ 1.52
SPIDR-220ENST00000522900 MYL6BP14649 208 aa24.54■■□□□ 1.52
SPIDR-220ENST00000522900 C9orf131Q5VYM1 1079 aa24.54■■□□□ 1.52
SPIDR-220ENST00000522900 ZNF652Q9Y2D9 606 aa24.54■■□□□ 1.52
SPIDR-220ENST00000522900 BCORQ6W2J9 1755 aa24.53■■□□□ 1.52
SPIDR-220ENST00000522900 PDE6BP35913 854 aa24.53■■□□□ 1.52
SPIDR-220ENST00000522900 TTLL7Q6ZT98 887 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms