RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CUL5Q93034 780 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 RANBP6O60518 1105 aaKnown RBP19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 SPTY2D1Q68D10 685 aaPredicted RBP19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 PPP4R3AQ6IN85 833 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 CBFA2T2O43439 604 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
PCDHA3-201ENST00000522353 PPP1R12BO60237 982 aaPredicted RBP19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 WDR78Q5VTH9 848 aa19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 MTERF4Q7Z6M4 381 aaKnown RBP19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 ZNF622Q969S3 477 aaKnown RBP eCLIP19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 NBPF6Q5VWK0 638 aa19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 NBPF5PQ86XG9 351 aaPredicted RBP19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 RAB34Q9BZG1 259 aa19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 ASXL2Q76L83 1435 aa19.02■□□□□ 0.64
PCDHA3-201ENST00000522353 ZNF213O14771 459 aa19.02■□□□□ 0.63
PCDHA3-201ENST00000522353 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.63
PCDHA3-201ENST00000522353 NOM1Q5C9Z4 860 aaKnown RBP19.02■□□□□ 0.63
PCDHA3-201ENST00000522353 CCDC8Q9H0W5 538 aaPredicted RBP19.02■□□□□ 0.63
PCDHA3-201ENST00000522353 EHMT1Q9H9B1 1298 aa19.02■□□□□ 0.63
PCDHA3-201ENST00000522353 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
PCDHA3-201ENST00000522353 PIK3R4Q99570 1358 aa19.01■□□□□ 0.63
PCDHA3-201ENST00000522353 PLCH2O75038 1416 aa19.01■□□□□ 0.63
PCDHA3-201ENST00000522353 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
PCDHA3-201ENST00000522353 SCLT1Q96NL6 688 aa19■□□□□ 0.63
PCDHA3-201ENST00000522353 FEZ1Q99689 392 aa19■□□□□ 0.63
PCDHA3-201ENST00000522353 HMGN5P82970 282 aaKnown RBP19■□□□□ 0.63
PCDHA3-201ENST00000522353 PHAXQ9H814 394 aaKnown RBP19■□□□□ 0.63
PCDHA3-201ENST00000522353 CABP5Q9NP86 173 aa19■□□□□ 0.63
PCDHA3-201ENST00000522353 ERLIN2O94905 339 aa19■□□□□ 0.63
PCDHA3-201ENST00000522353 MYO1BO43795 1136 aa19■□□□□ 0.63
PCDHA3-201ENST00000522353 HLA-DOAP06340 250 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 CCDC152Q4G0S7 254 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 DDB1Q16531 1140 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 UBE3BQ7Z3V4 1068 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
PCDHA3-201ENST00000522353 MAP7D2Q96T17 732 aa18.98■□□□□ 0.63
PCDHA3-201ENST00000522353 ANKRD13DQ6ZTN6 518 aa18.98■□□□□ 0.63
PCDHA3-201ENST00000522353 SH2B1Q9NRF2 756 aaPredicted RBP18.98■□□□□ 0.63
PCDHA3-201ENST00000522353 ECHDC1Q9NTX5 307 aa18.98■□□□□ 0.63
PCDHA3-201ENST00000522353 A2MP01023 1474 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 WDR97A6NE52 1622 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 ATP5J2-PTCD1G3V325 749 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 NUP62CLQ9H1M0 184 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 UQCRFS1P1P0C7P4 283 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 CATIPQ7Z7H3 387 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 SETDB2Q96T68 719 aa18.97■□□□□ 0.63
PCDHA3-201ENST00000522353 PI4KAP2A4QPH2 592 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 PI4KAP1Q8N8J0 262 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 PDE4BQ07343 736 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 TMEM266Q2M3C6 531 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 IFIT3O14879 490 aaKnown RBP18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 EVI5LQ96CN4 794 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 CCDC12Q8WUD4 166 aaPredicted RBP18.96■□□□□ 0.63
PCDHA3-201ENST00000522353 SMTNL1A8MU46 457 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 IL16Q14005 1332 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 GSTO1P78417 241 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 CCDC194A0A1B0GVG4 234 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 ATP6V1AP38606 617 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 C8orf76Q96K31 380 aa18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 SEPT11Q9NVA2 429 aaKnown RBP18.95■□□□□ 0.62
PCDHA3-201ENST00000522353 KIF5BP33176 963 aa18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 NLRP3Q96P20 1036 aa18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 UPF3BQ9BZI7 483 aaKnown RBP18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 CCDC181Q5TID7 509 aa18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 IBSPP21815 317 aaPredicted RBP18.94■□□□□ 0.62
PCDHA3-201ENST00000522353 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 KIF20AO95235 890 aa18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 CHMP4BP1P59074 171 aa18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 HDAC9Q9UKV0 1011 aa18.93■□□□□ 0.62
PCDHA3-201ENST00000522353 NEBLO76041 1014 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 CCDC83Q8IWF9 413 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 GOLGA8AA7E2F4 631 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 GOLGA8BA8MQT2 603 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 SPC24Q8NBT2 197 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 GOLIM4O00461 696 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 IL2RBP14784 551 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
PCDHA3-201ENST00000522353 SCAND2PQ9GZW5 306 aaPredicted RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 AKAP4Q5JQC9 854 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 CRNKL1Q9BZJ0 848 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 TSPY2A6NKD2 308 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 NLRP5P59047 1200 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms