RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
UBR5-207ENST00000520539 STX1AQ16623 288 aa17.85■□□□□ 0.45
UBR5-207ENST00000520539 SMAP1Q8IYB5 467 aaPredicted RBP17.85■□□□□ 0.45
UBR5-207ENST00000520539 RAB3IPQ96QF0 476 aaPredicted RBP17.85■□□□□ 0.45
UBR5-207ENST00000520539 MACROD2A1Z1Q3 448 aa17.85■□□□□ 0.45
UBR5-207ENST00000520539 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
UBR5-207ENST00000520539 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
UBR5-207ENST00000520539 GNAI3P08754 354 aa17.84■□□□□ 0.45
UBR5-207ENST00000520539 MIER3Q7Z3K6 550 aa17.84■□□□□ 0.45
UBR5-207ENST00000520539 CLNS1AP54105 237 aaKnown RBP17.84■□□□□ 0.45
UBR5-207ENST00000520539 KIAA0753Q2KHM9 967 aa17.84■□□□□ 0.45
UBR5-207ENST00000520539 EVC2Q86UK5 1308 aa17.84■□□□□ 0.45
UBR5-207ENST00000520539 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
UBR5-207ENST00000520539 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
UBR5-207ENST00000520539 USP47Q96K76 1375 aa17.83■□□□□ 0.45
UBR5-207ENST00000520539 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.45
UBR5-207ENST00000520539 MICALL1Q8N3F8 863 aa17.83■□□□□ 0.45
UBR5-207ENST00000520539 BUB1BO60566 1050 aaPredicted RBP17.83■□□□□ 0.45
UBR5-207ENST00000520539 HS1BP3Q53T59 392 aa17.83■□□□□ 0.45
UBR5-207ENST00000520539 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
UBR5-207ENST00000520539 CCDC129Q6ZRS4 1044 aa17.83■□□□□ 0.44
UBR5-207ENST00000520539 PSMC4P43686 418 aa17.83■□□□□ 0.44
UBR5-207ENST00000520539 ODF2LQ9ULJ1 636 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 PDCD7Q8N8D1 485 aaKnown RBP17.82■□□□□ 0.44
UBR5-207ENST00000520539 TNIP1Q15025 636 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 COG3Q96JB2 828 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
UBR5-207ENST00000520539 NUP155O75694 1391 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 URI1O94763 535 aaPredicted RBP17.82■□□□□ 0.44
UBR5-207ENST00000520539 PCK1P35558 622 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 SYCE3A1L190 88 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
UBR5-207ENST00000520539 BCAP29Q9UHQ4 241 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 CAPZA3Q96KX2 299 aa17.82■□□□□ 0.44
UBR5-207ENST00000520539 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 SELENOOQ9BVL4 669 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 CTAGE9A4FU28 777 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 CUX1P39880 1505 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 ZSCAN25Q6NSZ9 544 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 MAP2K2P36507 400 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 MAP3K21Q5TCX8 1036 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 MCM4P33991 863 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 PKD2Q13563 968 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 JADE2Q9NQC1 790 aa17.81■□□□□ 0.44
UBR5-207ENST00000520539 MCM6Q14566 821 aa17.8■□□□□ 0.44
UBR5-207ENST00000520539 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
UBR5-207ENST00000520539 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
UBR5-207ENST00000520539 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
UBR5-207ENST00000520539 LIMCH1Q9UPQ0 1083 aa17.8■□□□□ 0.44
UBR5-207ENST00000520539 CCDC40Q4G0X9 1142 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 FAM76AQ8TAV0 307 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 EIF2AQ9BY44 585 aaKnown RBP17.79■□□□□ 0.44
UBR5-207ENST00000520539 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
UBR5-207ENST00000520539 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 DBN1Q16643 649 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 TTC36A6NLP5 189 aa17.79■□□□□ 0.44
UBR5-207ENST00000520539 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBR5-207ENST00000520539 VIMP08670 466 aaKnown RBP17.78■□□□□ 0.44
UBR5-207ENST00000520539 NLRP5P59047 1200 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
UBR5-207ENST00000520539 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 UVSSAQ2YD98 709 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 WHAMMQ8TF30 809 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 POLE3Q9NRF9 147 aa17.78■□□□□ 0.44
UBR5-207ENST00000520539 GOLGA1Q92805 767 aa17.77■□□□□ 0.44
UBR5-207ENST00000520539 CPLX4Q7Z7G2 160 aa17.77■□□□□ 0.44
UBR5-207ENST00000520539 MATR3P43243 847 aaKnown RBP eCLIP17.77■□□□□ 0.446e-7■■□□□ 14.3
UBR5-207ENST00000520539 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
UBR5-207ENST00000520539 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
UBR5-207ENST00000520539 FYB2Q5VWT5 728 aa17.77■□□□□ 0.44
UBR5-207ENST00000520539 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
UBR5-207ENST00000520539 SPATS2Q86XZ4 545 aaKnown RBP17.77■□□□□ 0.43
UBR5-207ENST00000520539 ZNF287Q9HBT7 754 aa17.77■□□□□ 0.43
UBR5-207ENST00000520539 NEDD9Q14511 834 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 RASSF2P50749 326 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 GBP5Q96PP8 586 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.76■□□□□ 0.433e-7■■□□□ 13.9
UBR5-207ENST00000520539 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
UBR5-207ENST00000520539 KANK3Q6NY19 840 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 Q9H521 79 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
UBR5-207ENST00000520539 BRD2P25440 801 aaKnown RBP17.76■□□□□ 0.43
UBR5-207ENST00000520539 CROCCP2Q86T23 111 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 AFAP1L2Q8N4X5 818 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 SPATS2LQ9NUQ6 558 aaKnown RBP17.76■□□□□ 0.43
UBR5-207ENST00000520539 CFAP157Q5JU67 520 aa17.76■□□□□ 0.43
UBR5-207ENST00000520539 DDX19AQ9NUU7 478 aaKnown RBP17.76■□□□□ 0.43
UBR5-207ENST00000520539 ATRIPQ8WXE1 791 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
UBR5-207ENST00000520539 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 SEPT8Q92599 483 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms