RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 CICQ96RK0 1608 aaPredicted RBP20.29■□□□□ 0.84
SNHG6-201ENST00000520348 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
SNHG6-201ENST00000520348 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
SNHG6-201ENST00000520348 NGLY1Q96IV0 654 aa20.29■□□□□ 0.84
SNHG6-201ENST00000520348 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
SNHG6-201ENST00000520348 FKBP5Q13451 457 aaPredicted RBP20.28■□□□□ 0.84
SNHG6-201ENST00000520348 DDB1Q16531 1140 aa20.28■□□□□ 0.84
SNHG6-201ENST00000520348 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
SNHG6-201ENST00000520348 PHAXQ9H814 394 aaKnown RBP20.28■□□□□ 0.84
SNHG6-201ENST00000520348 TMOD3Q9NYL9 352 aa20.28■□□□□ 0.84
SNHG6-201ENST00000520348 ADCY9O60503 1353 aa20.28■□□□□ 0.84
SNHG6-201ENST00000520348 F6X3S4 739 aa20.27■□□□□ 0.84
SNHG6-201ENST00000520348 ATRNO75882 1429 aa20.27■□□□□ 0.83
SNHG6-201ENST00000520348 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
SNHG6-201ENST00000520348 PIGBQ92521 554 aa20.26■□□□□ 0.83
SNHG6-201ENST00000520348 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
SNHG6-201ENST00000520348 SMC5Q8IY18 1101 aa20.24■□□□□ 0.83
SNHG6-201ENST00000520348 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
SNHG6-201ENST00000520348 USP21Q9UK80 565 aa20.24■□□□□ 0.83
SNHG6-201ENST00000520348 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
SNHG6-201ENST00000520348 DNAAF4Q8WXU2 420 aa20.23■□□□□ 0.83
SNHG6-201ENST00000520348 ANXA1P04083 346 aa20.22■□□□□ 0.83
SNHG6-201ENST00000520348 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
SNHG6-201ENST00000520348 MEIS3Q99687 375 aa20.22■□□□□ 0.83
SNHG6-201ENST00000520348 ATG3Q9NT62 314 aa20.22■□□□□ 0.83
SNHG6-201ENST00000520348 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
SNHG6-201ENST00000520348 TJP1Q07157 1748 aa20.21■□□□□ 0.83
SNHG6-201ENST00000520348 PI4KAP2A4QPH2 592 aa20.2■□□□□ 0.82
SNHG6-201ENST00000520348 SIRT2Q8IXJ6 389 aa20.2■□□□□ 0.82
SNHG6-201ENST00000520348 PI4KAP1Q8N8J0 262 aa20.2■□□□□ 0.82
SNHG6-201ENST00000520348 CCDC9Q9Y3X0 531 aaKnown RBP20.2■□□□□ 0.82
SNHG6-201ENST00000520348 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
SNHG6-201ENST00000520348 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
SNHG6-201ENST00000520348 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
SNHG6-201ENST00000520348 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
SNHG6-201ENST00000520348 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
SNHG6-201ENST00000520348 AFF2P51816 1311 aa20.19■□□□□ 0.82
SNHG6-201ENST00000520348 ONECUT3O60422 494 aaPredicted RBP20.18■□□□□ 0.82
SNHG6-201ENST00000520348 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
SNHG6-201ENST00000520348 GNAI3P08754 354 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
SNHG6-201ENST00000520348 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
SNHG6-201ENST00000520348 SRCIN1Q9C0H9 1055 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 C1orf115Q9H7X2 142 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
SNHG6-201ENST00000520348 RREB1Q92766 1687 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 NBPF26B4DH59 902 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 CEP85Q6P2H3 762 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 NBPF10Q6P3W6 841 aaKnown RBP20.17■□□□□ 0.82
SNHG6-201ENST00000520348 NBPF15Q8N660 670 aa20.17■□□□□ 0.82
SNHG6-201ENST00000520348 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
SNHG6-201ENST00000520348 GJD4Q96KN9 370 aaPredicted RBP20.16■□□□□ 0.82
SNHG6-201ENST00000520348 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
SNHG6-201ENST00000520348 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
SNHG6-201ENST00000520348 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
SNHG6-201ENST00000520348 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
SNHG6-201ENST00000520348 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
SNHG6-201ENST00000520348 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
SNHG6-201ENST00000520348 PDZRN3Q9UPQ7 1066 aa20.15■□□□□ 0.82
SNHG6-201ENST00000520348 MAP3K2Q9Y2U5 619 aa20.15■□□□□ 0.82
SNHG6-201ENST00000520348 UTYO14607 1347 aa20.14■□□□□ 0.81
SNHG6-201ENST00000520348 PTCD1O75127 700 aaKnown RBP20.14■□□□□ 0.81
SNHG6-201ENST00000520348 GNAI2P04899 355 aa20.14■□□□□ 0.81
SNHG6-201ENST00000520348 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
SNHG6-201ENST00000520348 SLC4A9Q96Q91 983 aa20.14■□□□□ 0.81
SNHG6-201ENST00000520348 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
SNHG6-201ENST00000520348 MYL6BP14649 208 aa20.12■□□□□ 0.81
SNHG6-201ENST00000520348 SKAP1Q86WV1 359 aa20.12■□□□□ 0.81
SNHG6-201ENST00000520348 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
SNHG6-201ENST00000520348 METTL22Q9BUU2 404 aaPredicted RBP20.12■□□□□ 0.81
SNHG6-201ENST00000520348 DCTPP1Q9H773 170 aa20.12■□□□□ 0.81
SNHG6-201ENST00000520348 PLBD2Q8NHP8 589 aa20.11■□□□□ 0.81
SNHG6-201ENST00000520348 NUCB1Q02818 461 aa20.1■□□□□ 0.81
SNHG6-201ENST00000520348 ANKRD13DQ6ZTN6 518 aa20.1■□□□□ 0.81
SNHG6-201ENST00000520348 COL15A1P39059 1388 aa20.09■□□□□ 0.81
SNHG6-201ENST00000520348 STARD3NLO95772 234 aa20.09■□□□□ 0.81
SNHG6-201ENST00000520348 A1BGP04217 495 aa20.09■□□□□ 0.81
SNHG6-201ENST00000520348 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
SNHG6-201ENST00000520348 UBTFL1P0CB47 393 aaPredicted RBP20.09■□□□□ 0.81
SNHG6-201ENST00000520348 CYP19A1P11511 503 aaPredicted RBP20.09■□□□□ 0.81
SNHG6-201ENST00000520348 COL5A3P25940 1745 aaPredicted RBP20.09■□□□□ 0.81
SNHG6-201ENST00000520348 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
SNHG6-201ENST00000520348 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
SNHG6-201ENST00000520348 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
SNHG6-201ENST00000520348 HMMRO75330 724 aa20.07■□□□□ 0.8
SNHG6-201ENST00000520348 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
SNHG6-201ENST00000520348 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
SNHG6-201ENST00000520348 MTX1Q13505 466 aa20.07■□□□□ 0.8
SNHG6-201ENST00000520348 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
SNHG6-201ENST00000520348 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
SNHG6-201ENST00000520348 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
SNHG6-201ENST00000520348 NEURL1BA8MQ27 555 aa20.06■□□□□ 0.8
SNHG6-201ENST00000520348 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
SNHG6-201ENST00000520348 PDE4AP27815 886 aa20.06■□□□□ 0.8
SNHG6-201ENST00000520348 ACSBG1Q96GR2 724 aa20.06■□□□□ 0.8
SNHG6-201ENST00000520348 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms