RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 NIFKQ9BYG3 293 aaKnown RBP4.57□□□□□ -1.68
CCNC-208ENST00000519617 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
CCNC-208ENST00000519617 AVENQ9NQS1 362 aaPredicted RBP4.57□□□□□ -1.68
CCNC-208ENST00000519617 NOP53Q9NZM5 478 aaKnown RBP4.57□□□□□ -1.68
CCNC-208ENST00000519617 TBC1D2BQ9UPU7 963 aa4.57□□□□□ -1.68
CCNC-208ENST00000519617 ATXN7O15265 892 aaPredicted RBP4.56□□□□□ -1.68
CCNC-208ENST00000519617 PLA2G4AP47712 749 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 SMTNP53814 917 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 TNP2Q05952 138 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 ZNF295-AS1Q8N0V1 137 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 Q8N3U1 123 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 PRM3Q9NNZ6 103 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 KLF15Q9UIH9 416 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 HCN2Q9UL51 889 aa4.56□□□□□ -1.68
CCNC-208ENST00000519617 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 MAPTP10636 758 aaKnown RBP4.55□□□□□ -1.68
CCNC-208ENST00000519617 ADH6P28332 368 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 GDF10P55107 478 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 MAP7D1Q3KQU3 841 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 OXLD1Q5BKU9 147 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 CHSY3Q70JA7 882 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 SLC4A9Q96Q91 983 aa4.55□□□□□ -1.68
CCNC-208ENST00000519617 A0A1W2PNR3 127 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 CDK2AP1O14519 115 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 CHRNA4P43681 627 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 MTFR1Q15390 333 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 FCHSD1Q86WN1 690 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 AIDAQ96BJ3 306 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 ZDHHC3Q9NYG2 299 aa4.54□□□□□ -1.68
CCNC-208ENST00000519617 IQSEC3Q9UPP2 1182 aaPredicted RBP4.54□□□□□ -1.68
CCNC-208ENST00000519617 FAM157BP0CG42 384 aa4.53□□□□□ -1.68
CCNC-208ENST00000519617 NBPF1Q3BBV0 1214 aa4.53□□□□□ -1.68
CCNC-208ENST00000519617 ARSJQ5FYB0 599 aaPredicted RBP4.53□□□□□ -1.68
CCNC-208ENST00000519617 SAMD5Q5TGI4 173 aa4.53□□□□□ -1.68
CCNC-208ENST00000519617 ZIC5Q96T25 663 aa4.53□□□□□ -1.68
CCNC-208ENST00000519617 DCDC2BA2VCK2 349 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 A6NJY4 79 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 TMEM229AB2RXF0 380 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 KHNYNO15037 678 aaKnown RBP4.52□□□□□ -1.69
CCNC-208ENST00000519617 TATP17735 454 aaPredicted RBP4.52□□□□□ -1.69
CCNC-208ENST00000519617 CD33P20138 364 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 ITGB7P26010 798 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 VAC14Q08AM6 782 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 LAMC2Q13753 1193 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 ZNF468Q5VIY5 522 aaPredicted RBP4.52□□□□□ -1.69
CCNC-208ENST00000519617 PLPP7Q8NBV4 271 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 TRIM11Q96F44 468 aa4.52□□□□□ -1.69
CCNC-208ENST00000519617 EFSO43281 561 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 PCBP4P57723 403 aaKnown RBP4.51□□□□□ -1.69
CCNC-208ENST00000519617 WASHC4Q2M389 1173 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 KRTAP1-3Q8IUG1 177 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 MDFIQ99750 246 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 PLVAPQ9BX97 442 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 SEMA6BQ9H3T3 888 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 SERTAD1Q9UHV2 236 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 PRR12Q9ULL5 1215 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 PCDHGA11Q9Y5H2 935 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 USP3Q9Y6I4 520 aa4.51□□□□□ -1.69
CCNC-208ENST00000519617 ELOA3CA0A087WX78 387 aaPredicted RBP4.5□□□□□ -1.69
CCNC-208ENST00000519617 ELOA3DA6NLF2 546 aaPredicted RBP4.5□□□□□ -1.69
CCNC-208ENST00000519617 SPATA31C1P0DKV0 1188 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 SOX11P35716 441 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 GATA4P43694 442 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 DOC2BQ14184 412 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 ELOA3BQ3SY89 546 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 ELOA3Q8NG57 546 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 STRN4Q9NRL3 753 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 CABP1Q9NZU7 370 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 MARK1Q9P0L2 795 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 GJA3Q9Y6H8 435 aa4.5□□□□□ -1.69
CCNC-208ENST00000519617 SEMA3FQ13275 785 aa4.49□□□□□ -1.69
CCNC-208ENST00000519617 GDPD2Q9HCC8 539 aa4.49□□□□□ -1.69
CCNC-208ENST00000519617 SPDYE3A6NKU9 549 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 ADARB2-AS1A8MUL3 147 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 BACH1O14867 736 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 LZTS3O60299 673 aaPredicted RBP4.48□□□□□ -1.69
CCNC-208ENST00000519617 SIN3BO75182 1162 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 ALAS2P22557 587 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 TEAD4Q15561 434 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 BICDL1Q6ZP65 573 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 C7orf43Q8WVR3 580 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 PSMG3-AS1Q96PY0 264 aa4.48□□□□□ -1.69
CCNC-208ENST00000519617 SCHIP1Q9P0W5 487 aaPredicted RBP4.48□□□□□ -1.69
CCNC-208ENST00000519617 EML1O00423 815 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 TXLNAP40222 546 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 ABL2P42684 1182 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 COL9A3Q14050 684 aaPredicted RBP4.47□□□□□ -1.69
CCNC-208ENST00000519617 RSPO4Q2I0M5 234 aaPredicted RBP4.47□□□□□ -1.69
CCNC-208ENST00000519617 NKAPLQ5M9Q1 402 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 SYT9Q86SS6 491 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 ZDHHC1Q8WTX9 485 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 L3MBTL2Q969R5 705 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 PRDM6Q9NQX0 595 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 GPC6Q9Y625 555 aaPredicted RBP4.47□□□□□ -1.69
CCNC-208ENST00000519617 PARP3Q9Y6F1 533 aa4.47□□□□□ -1.69
CCNC-208ENST00000519617 PIK3CDO00329 1044 aa4.46□□□□□ -1.7
CCNC-208ENST00000519617 NOS2P35228 1153 aa4.46□□□□□ -1.7
CCNC-208ENST00000519617 EPHA4P54764 986 aa4.46□□□□□ -1.7
CCNC-208ENST00000519617 EML3Q32P44 896 aa4.46□□□□□ -1.7
CCNC-208ENST00000519617 PRRT3Q5FWE3 981 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms