RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
SH2D4A-202ENST00000518040 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
SH2D4A-202ENST00000518040 DDR1Q08345 913 aa13.71□□□□□ -0.21
SH2D4A-202ENST00000518040 FKBP8Q14318 412 aa13.71□□□□□ -0.21
SH2D4A-202ENST00000518040 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
SH2D4A-202ENST00000518040 EYA1Q99502 592 aa13.71□□□□□ -0.21
SH2D4A-202ENST00000518040 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
SH2D4A-202ENST00000518040 RASSF7Q02833 373 aa13.7□□□□□ -0.22
SH2D4A-202ENST00000518040 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 TM4SF1P30408 202 aa13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 FOXN1O15353 648 aa13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 CRKLP46109 303 aaKnown RBP13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
SH2D4A-202ENST00000518040 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 ZPR1O75312 459 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 CABP4P57796 275 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 MKRN1Q9UHC7 482 aaKnown RBP13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
SH2D4A-202ENST00000518040 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
SH2D4A-202ENST00000518040 TIAM2Q8IVF5 1701 aa13.67□□□□□ -0.22
SH2D4A-202ENST00000518040 POTECB2RU33 542 aa13.66□□□□□ -0.22
SH2D4A-202ENST00000518040 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
SH2D4A-202ENST00000518040 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
SH2D4A-202ENST00000518040 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
SH2D4A-202ENST00000518040 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
SH2D4A-202ENST00000518040 DLEC1Q9Y238 1755 aa13.64□□□□□ -0.23
SH2D4A-202ENST00000518040 H0YIN7 160 aa13.64□□□□□ -0.23
SH2D4A-202ENST00000518040 NFKBIEO00221 500 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 USPL1Q5W0Q7 1092 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 C2CD5Q86YS7 1000 aa13.63□□□□□ -0.23
SH2D4A-202ENST00000518040 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 NRXN2Q9P2S2 1712 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 MTHFSP49914 203 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 ABHD8Q96I13 439 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 WBP1LQ9NX94 342 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
SH2D4A-202ENST00000518040 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 SERPINB2P05120 415 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 EIF4A2Q14240 407 aaKnown RBP13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 NFIXQ14938 502 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 LDHDQ86WU2 507 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
SH2D4A-202ENST00000518040 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 LBX1P52954 281 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 MLLT1Q03111 559 aaPredicted RBP13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 TJP1Q07157 1748 aa13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SH2D4A-202ENST00000518040 VEGFBP49765 207 aa13.59□□□□□ -0.23
SH2D4A-202ENST00000518040 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
SH2D4A-202ENST00000518040 MAP2K1Q02750 393 aaPredicted RBP13.59□□□□□ -0.23
SH2D4A-202ENST00000518040 PDE6BP35913 854 aa13.58□□□□□ -0.24
SH2D4A-202ENST00000518040 RGS19P49795 217 aa13.58□□□□□ -0.24
SH2D4A-202ENST00000518040 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
SH2D4A-202ENST00000518040 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
SH2D4A-202ENST00000518040 COL15A1P39059 1388 aa13.57□□□□□ -0.24
SH2D4A-202ENST00000518040 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
SH2D4A-202ENST00000518040 DDNO94850 711 aaPredicted RBP13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 SCN4AP35499 1836 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 RASSF10A6NK89 507 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 C21orf2O43822 256 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 FER1L6Q2WGJ9 1857 aa13.56□□□□□ -0.24
SH2D4A-202ENST00000518040 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
SH2D4A-202ENST00000518040 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
SH2D4A-202ENST00000518040 TAF1DQ9H5J8 278 aaPredicted RBP13.55□□□□□ -0.24
SH2D4A-202ENST00000518040 ITGBL1O95965 494 aaPredicted RBP13.54□□□□□ -0.24
SH2D4A-202ENST00000518040 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
SH2D4A-202ENST00000518040 A0A087WZG4 1122 aa13.53□□□□□ -0.24
SH2D4A-202ENST00000518040 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
SH2D4A-202ENST00000518040 BEGAINQ9BUH8 593 aa13.53□□□□□ -0.24
SH2D4A-202ENST00000518040 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
SH2D4A-202ENST00000518040 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
SH2D4A-202ENST00000518040 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms