RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 EGFLAMQ63HQ2 1017 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ALKBH2Q6NS38 261 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 FAM160A2Q8N612 972 aaPredicted RBP3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 PMFBP1Q8TBY8 1022 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 SCG3Q8WXD2 468 aaKnown RBP3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 DMRTB1Q96MA1 342 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 FAM129BQ96TA1 746 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 SAP130Q9H0E3 1048 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 PIF1Q9H611 641 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF358Q9NW07 568 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 TBX22Q9Y458 520 aa3.71□□□□□ -1.82
SCARNA3-201ENST00000517097 ESPNB1AK53 854 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 TMEM229AB2RXF0 380 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 TNFRSF10AO00220 468 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 GDF9O60383 454 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 EIF1AXP47813 144 aaKnown RBP3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PRR20EP86478 221 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PRR20CP86479 221 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PRR20DP86480 221 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PRR20BP86481 221 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PRR20AP86496 221 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 AAMPQ13685 434 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF787Q6DD87 383 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 SDE2Q6IQ49 451 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PTCRAQ6ISU1 281 aaPredicted RBP3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 C16orf46Q6P387 395 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 VTI1AQ96AJ9 217 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 ALKBH8Q96BT7 664 aaKnown RBP3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 SETDB2Q96T68 719 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 SPSB2Q99619 263 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 UNC93B1Q9H1C4 597 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 EMILIN1Q9Y6C2 1016 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 ATAD2Q6PL18 1390 aa3.7□□□□□ -1.82
SCARNA3-201ENST00000517097 PNMA6FA0A0J9YX94 578 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 MARCH6O60337 910 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 MYCP01106 439 aaPredicted RBP3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 ARID5AQ03989 594 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 PDE3BQ13370 1112 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 PKDCCQ504Y2 493 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 SEPT12Q8IYM1 358 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 TNS4Q8IZW8 715 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 FOXJ1Q92949 421 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 SLC10A4Q96EP9 437 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 NIF3L1Q9GZT8 377 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 ZSWIM4Q9H7M6 989 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 PRDM9Q9NQV7 894 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 INPP5FQ9Y2H2 1132 aa3.69□□□□□ -1.82
SCARNA3-201ENST00000517097 A0A1W2PRU2 124 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 FAM187AA6NFU0 413 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 POTECB2RU33 542 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 TNFRSF10BO14763 440 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 BACH1O14867 736 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 RACK1P63244 317 aaKnown RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 AGERQ15109 404 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 ENOX2Q16206 610 aaKnown RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 C4orf48Q5BLP8 95 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 COX20Q5RI15 118 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 SOGA3Q5TF21 947 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 ALG1LQ6GMV1 187 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 NOL8Q76FK4 1167 aaKnown RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 BPHLQ86WA6 291 aaPredicted RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 NLGN1Q8N2Q7 840 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 CCDC24Q8N4L8 307 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 CHMP7Q8WUX9 453 aaPredicted RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 GPATCH3Q96I76 525 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 SPACA7Q96KW9 195 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 TSPAN10Q9H1Z9 355 aaPredicted RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 PKD2L1Q9P0L9 805 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 STIM2Q9P246 746 aa3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 DDX41Q9UJV9 622 aaKnown RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 FCF1Q9Y324 198 aaKnown RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 ARID4BQ4LE39 1312 aaPredicted RBP3.68□□□□□ -1.82
SCARNA3-201ENST00000517097 PPP1R12BO60237 982 aaPredicted RBP3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 RAB11FIP3O75154 756 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 DGAT1O75907 488 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 STK10O94804 968 aaKnown RBP3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 CTSHP09668 335 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 GNA15P30679 374 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 EPHA4P54764 986 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 TCEAL1Q15170 157 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 LINC01559Q495D7 138 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF394Q53GI3 561 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 DHX37Q8IY37 1157 aaKnown RBP3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF654Q8IZM8 581 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 MICAL1Q8TDZ2 1067 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 BAP1Q92560 729 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF775Q96BV0 537 aaPredicted RBP3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 C1QTNF2Q9BXJ5 285 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 OSBPL2Q9H1P3 480 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 CYLDQ9NQC7 956 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 PCDHGB7Q9Y5F8 929 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 AK5Q9Y6K8 562 aa3.67□□□□□ -1.82
SCARNA3-201ENST00000517097 WASLO00401 505 aaPredicted RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ZBTB39O15060 712 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ST8SIA5O15466 376 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ZBTB24O43167 697 aaPredicted RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 STAU1O95793 577 aaKnown RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 SCTRP47872 440 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms