RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 QSER1Q2KHR3 1735 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 CCDC27Q2M243 656 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 KAT6BQ8WYB5 2073 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 CICQ96RK0 1608 aaPredicted RBP6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 MYH16Q9H6N6 1097 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 USP42Q9H9J4 1324 aaKnown RBP6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 IFT57Q9NWB7 429 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 ADAMTS7Q9UKP4 1686 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
RN7SKP260-201ENST00000516907 ITGB4P16144 1822 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 EP400Q96L91 3159 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 KCPQ6ZWJ8 1503 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 APAF1O14727 1248 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 GRIN3BO60391 1043 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 HSP90B1P14625 803 aaKnown RBP6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 PTGER2P43116 358 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 ST5P78524 1137 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 DCTN1Q14203 1278 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 FAM9BQ8IZU0 186 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 ARHGEF1Q92888 912 aaKnown RBP6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 NARFQ9UHQ1 456 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 RRP7AQ9Y3A4 280 aaKnown RBP6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 CASZ1Q86V15 1759 aa6.62□□□□□ -1.35
RN7SKP260-201ENST00000516907 CARMIL3Q8ND23 1372 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 IL16Q14005 1332 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 MMP10P09238 476 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 EIF4A1P60842 406 aaKnown RBP6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 TGFB2P61812 414 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 GPR162Q16538 588 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 HSP90AB3PQ58FF7 597 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 DIEXFQ68CQ4 756 aaKnown RBP6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 SETDB2Q96T68 719 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 STK31Q9BXU1 1019 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 FHDC1Q9C0D6 1143 aaPredicted RBP6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 NYXQ9GZU5 481 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 ZBTB1Q9Y2K1 713 aa6.61□□□□□ -1.35
RN7SKP260-201ENST00000516907 GIGYF1O75420 1035 aaPredicted RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 DDX58O95786 925 aaKnown RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 GYS1P13807 737 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 EIF5P55010 431 aaKnown RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 INTS5Q6P9B9 1019 aaKnown RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 WDR63Q8IWG1 891 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 PELP1Q8IZL8 1130 aaKnown RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 SLC4A9Q96Q91 983 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 SYT17Q9BSW7 474 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 TMX4Q9H1E5 349 aaPredicted RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 HYPKQ9NX55 129 aa6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 DBF4Q9UBU7 674 aaPredicted RBP6.6□□□□□ -1.35
RN7SKP260-201ENST00000516907 ERVV-1B6SEH8 477 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 CHL1O00533 1208 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 EIF2S2P20042 333 aaKnown RBP6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 PDE6BP35913 854 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 GOLGA2Q08379 1002 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 CCDC30Q5VVM6 783 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 TPTE2Q6XPS3 522 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 CNBD1Q8NA66 436 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 SGIP1Q9BQI5 828 aa6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 THUMPD2Q9BTF0 503 aaKnown RBP6.59□□□□□ -1.35
RN7SKP260-201ENST00000516907 RNF123Q5XPI4 1314 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 A1BGP04217 495 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 MYL6BP14649 208 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 PARP10Q53GL7 1025 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 PPP1R42Q7Z4L9 355 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 NBPF5PQ86XG9 351 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 MIS18AQ9NYP9 233 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 TRIM35Q9UPQ4 493 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 USP16Q9Y5T5 823 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 UBR2Q8IWV8 1755 aa6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 COL5A3P25940 1745 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP260-201ENST00000516907 TAF1LQ8IZX4 1826 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 TJP1Q07157 1748 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 E9PSI1 815 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 H0YIN7 160 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 KCNQ3O43525 872 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 SERPINB2P05120 415 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 NEXNQ0ZGT2 675 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 FKBP8Q14318 412 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 DUSP27Q5VZP5 1158 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 BICDL1Q6ZP65 573 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 MBIPQ9NS73 344 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 PIM2Q9P1W9 311 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 SRP68Q9UHB9 627 aaKnown RBP6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 TBC1D2BQ9UPU7 963 aa6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
RN7SKP260-201ENST00000516907 MAP3K15Q6ZN16 1313 aa6.56□□□□□ -1.36
RN7SKP260-201ENST00000516907 UBR3Q6ZT12 1888 aa6.56□□□□□ -1.36
RN7SKP260-201ENST00000516907 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
RN7SKP260-201ENST00000516907 CAMTA2O94983 1202 aa6.56□□□□□ -1.36
RN7SKP260-201ENST00000516907 NFIXQ14938 502 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms