RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 WWC3Q9ULE0 1092 aa8.88□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 DOLKQ9UPQ8 538 aa8.88□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 MPSTP25325 297 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 PTK2Q05397 1052 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 FUT2Q10981 343 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 OS9Q13438 667 aaPredicted RBP8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 AAMPQ13685 434 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 OXLD1Q5BKU9 147 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 PRPF38AQ8NAV1 312 aaKnown RBP8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 STAG1Q8WVM7 1258 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 CRELD1Q96HD1 420 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 JADE2Q9NQC1 790 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 TCEAL9Q9UHQ7 104 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 GPSM3Q9Y4H4 160 aa8.87□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 COL9A1P20849 921 aa8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 PLEKHG4Q58EX7 1191 aa8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 SENP7Q9BQF6 1050 aa8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 TYW1Q9NV66 732 aaKnown RBP8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 RPS6KL1Q9Y6S9 549 aa8.86□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 EXOC5O00471 708 aa8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 NEFMP07197 916 aa8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 PDGFRBP09619 1106 aa8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 GNA15P30679 374 aa8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 C8orf48Q96LL4 319 aa8.85□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 HSP90AA1P07900 732 aaKnown RBP8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 SERINC3Q13530 473 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 TSGA10IPQ3SY00 556 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 ALKBH2Q6NS38 261 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 HS2ST1Q7LGA3 356 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 RNPC3Q96LT9 517 aaKnown RBP8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 SWAP70Q9UH65 585 aa8.84□□□□□ -0.99
RNU6ATAC39P-201ENST00000516309 SMAPO00193 183 aa8.83□□□□□ -1
RNU6ATAC39P-201ENST00000516309 AMOTL1Q8IY63 956 aa8.83□□□□□ -1
RNU6ATAC39P-201ENST00000516309 ALKBH8Q96BT7 664 aaKnown RBP8.83□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SRPK1Q96SB4 655 aaKnown RBP8.83□□□□□ -1
RNU6ATAC39P-201ENST00000516309 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 KIF4AO95239 1232 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GJA8P48165 433 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SLC4A3P48751 1232 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GYS2P54840 703 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 UBE4AQ14139 1066 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 RNF20Q5VTR2 975 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CCSAPQ6IQ19 270 aaPredicted RBP8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SETDB2Q96T68 719 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 FAM129BQ96TA1 746 aa8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SRA1Q9HD15 236 aaKnown RBP8.82□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CCDC189A1A4V9 331 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CCER2I3L3R5 266 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GPR182O15218 404 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 AMPD3Q01432 767 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SAFB2Q14151 953 aaKnown RBP eCLIP8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 Q3C1V9 767 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 ODR4Q5SWX8 454 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 RELTQ969Z4 430 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CEP89Q96ST8 783 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 NAP1L4Q99733 375 aaKnown RBP8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CCDC87Q9NVE4 849 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SIRPGQ9P1W8 387 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GGT7Q9UJ14 662 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 AK5Q9Y6K8 562 aa8.81□□□□□ -1
RNU6ATAC39P-201ENST00000516309 M0R2N6 131 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 FOXO3O43524 673 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CHMP4BP1P59074 171 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PDXDC2PQ6P474 469 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 C3orf67Q6ZVT6 689 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 NEUROD4Q9HD90 331 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PCDHGA11Q9Y5H2 935 aa8.8□□□□□ -1
RNU6ATAC39P-201ENST00000516309 CDC45O75419 566 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 SSBP05455 408 aaKnown RBP eCLIP8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PTMAP06454 111 aaKnown RBP8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 EIF1AXP47813 144 aaKnown RBP8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PPP4CP60510 307 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PAK2Q13177 524 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 GPRASP2Q96D09 838 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 QTRT2Q9H974 415 aaKnown RBP8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 MAP10Q9P2G4 905 aa8.79□□□□□ -1
RNU6ATAC39P-201ENST00000516309 PLIN1O60240 522 aa8.78□□□□□ -1
RNU6ATAC39P-201ENST00000516309 FZD6O60353 706 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms