RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TTLL6Q8N841 843 aa14.54□□□□□ -0.08
CLDND1-227ENST00000513452 POTECB2RU33 542 aa14.53□□□□□ -0.08
CLDND1-227ENST00000513452 FOXN1O15353 648 aa14.53□□□□□ -0.08
CLDND1-227ENST00000513452 MTHFSP49914 203 aa14.53□□□□□ -0.08
CLDND1-227ENST00000513452 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
CLDND1-227ENST00000513452 AFDNP55196 1824 aaKnown RBP14.52□□□□□ -0.08
CLDND1-227ENST00000513452 NRXN2Q9P2S2 1712 aa14.52□□□□□ -0.08
CLDND1-227ENST00000513452 NFIXQ14938 502 aa14.52□□□□□ -0.09
CLDND1-227ENST00000513452 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
CLDND1-227ENST00000513452 NFATC2IPQ8NCF5 419 aa14.52□□□□□ -0.09
CLDND1-227ENST00000513452 CARMIL3Q8ND23 1372 aa14.51□□□□□ -0.09
CLDND1-227ENST00000513452 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
CLDND1-227ENST00000513452 AMOTQ4VCS5 1084 aa14.51□□□□□ -0.09
CLDND1-227ENST00000513452 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
CLDND1-227ENST00000513452 C2CD5Q86YS7 1000 aa14.51□□□□□ -0.09
CLDND1-227ENST00000513452 COL15A1P39059 1388 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 CNTNAP1P78357 1384 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
CLDND1-227ENST00000513452 SERPINB2P05120 415 aa14.49□□□□□ -0.09
CLDND1-227ENST00000513452 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
CLDND1-227ENST00000513452 POTEJP0CG39 1038 aa14.49□□□□□ -0.09
CLDND1-227ENST00000513452 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
CLDND1-227ENST00000513452 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
CLDND1-227ENST00000513452 H0YIN7 160 aa14.48□□□□□ -0.09
CLDND1-227ENST00000513452 CTCFP49711 727 aaPredicted RBP14.48□□□□□ -0.09
CLDND1-227ENST00000513452 AEBP1Q8IUX7 1158 aa14.48□□□□□ -0.09
CLDND1-227ENST00000513452 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
CLDND1-227ENST00000513452 NARFQ9UHQ1 456 aa14.48□□□□□ -0.09
CLDND1-227ENST00000513452 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
CLDND1-227ENST00000513452 C21orf2O43822 256 aa14.46□□□□□ -0.09
CLDND1-227ENST00000513452 CYP19A1P11511 503 aaPredicted RBP14.46□□□□□ -0.09
CLDND1-227ENST00000513452 FAM161AQ3B820 660 aa14.46□□□□□ -0.09
CLDND1-227ENST00000513452 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
CLDND1-227ENST00000513452 DDNO94850 711 aaPredicted RBP14.45□□□□□ -0.1
CLDND1-227ENST00000513452 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
CLDND1-227ENST00000513452 BICDL1Q6ZP65 573 aa14.45□□□□□ -0.1
CLDND1-227ENST00000513452 ZNF622Q969S3 477 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLDND1-227ENST00000513452 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
CLDND1-227ENST00000513452 PASKQ96RG2 1323 aa14.44□□□□□ -0.1
CLDND1-227ENST00000513452 VEGFBP49765 207 aa14.44□□□□□ -0.1
CLDND1-227ENST00000513452 LBX1P52954 281 aa14.44□□□□□ -0.1
CLDND1-227ENST00000513452 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
CLDND1-227ENST00000513452 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
CLDND1-227ENST00000513452 TAOK3Q9H2K8 898 aa14.43□□□□□ -0.1
CLDND1-227ENST00000513452 SLC52A2Q9HAB3 445 aa14.43□□□□□ -0.1
CLDND1-227ENST00000513452 FER1L6Q2WGJ9 1857 aa14.43□□□□□ -0.1
CLDND1-227ENST00000513452 ANKRD31Q8N7Z5 1873 aa14.43□□□□□ -0.1
CLDND1-227ENST00000513452 SULT6B1Q6IMI4 303 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 LDHDQ86WU2 507 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 ABHD8Q96I13 439 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 POLR3GLQ9BT43 218 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 MRC1P22897 1456 aa14.42□□□□□ -0.1
CLDND1-227ENST00000513452 LTBP3Q9NS15 1303 aa14.41□□□□□ -0.1
CLDND1-227ENST00000513452 IQCA1LA6NCM1 817 aa14.41□□□□□ -0.1
CLDND1-227ENST00000513452 TMEM88BA6NKF7 163 aa14.41□□□□□ -0.1
CLDND1-227ENST00000513452 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
CLDND1-227ENST00000513452 WBP1LQ9NX94 342 aa14.41□□□□□ -0.1
CLDND1-227ENST00000513452 PDE6BP35913 854 aa14.4□□□□□ -0.1
CLDND1-227ENST00000513452 AKAP4Q5JQC9 854 aa14.4□□□□□ -0.1
CLDND1-227ENST00000513452 TBC1D9BQ66K14 1250 aa14.4□□□□□ -0.1
CLDND1-227ENST00000513452 BRIP1Q9BX63 1249 aa14.4□□□□□ -0.1
CLDND1-227ENST00000513452 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
CLDND1-227ENST00000513452 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
CLDND1-227ENST00000513452 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
CLDND1-227ENST00000513452 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
CLDND1-227ENST00000513452 EAPPQ56P03 285 aaPredicted RBP14.39□□□□□ -0.11
CLDND1-227ENST00000513452 PRR5LQ6MZQ0 368 aa14.39□□□□□ -0.11
CLDND1-227ENST00000513452 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
CLDND1-227ENST00000513452 PDZRN3Q9UPQ7 1066 aa14.39□□□□□ -0.11
CLDND1-227ENST00000513452 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
CLDND1-227ENST00000513452 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
CLDND1-227ENST00000513452 RNMTO43148 476 aaKnown RBP14.37□□□□□ -0.11
CLDND1-227ENST00000513452 ITGBL1O95965 494 aaPredicted RBP14.37□□□□□ -0.11
CLDND1-227ENST00000513452 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
CLDND1-227ENST00000513452 SCN4AP35499 1836 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 A0A087WZG4 1122 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 NPHP1O15259 732 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 EIF5P55010 431 aaKnown RBP14.36□□□□□ -0.11
CLDND1-227ENST00000513452 SOGA3Q5TF21 947 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 CNKSR1Q969H4 720 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 ZNF330Q9Y3S2 320 aaPredicted RBP14.36□□□□□ -0.11
CLDND1-227ENST00000513452 UBR2Q8IWV8 1755 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
CLDND1-227ENST00000513452 RASSF10A6NK89 507 aa14.35□□□□□ -0.11
CLDND1-227ENST00000513452 STARD3NLO95772 234 aa14.35□□□□□ -0.11
CLDND1-227ENST00000513452 MLLT1Q03111 559 aaPredicted RBP14.35□□□□□ -0.11
CLDND1-227ENST00000513452 STYK1Q6J9G0 422 aa14.35□□□□□ -0.11
CLDND1-227ENST00000513452 CNBD1Q8NA66 436 aa14.35□□□□□ -0.11
CLDND1-227ENST00000513452 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
CLDND1-227ENST00000513452 ADAMTSL1Q8N6G6 1762 aa14.34□□□□□ -0.11
CLDND1-227ENST00000513452 ARFGEF2Q9Y6D5 1785 aa14.34□□□□□ -0.11
CLDND1-227ENST00000513452 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
CLDND1-227ENST00000513452 IL13P35225 146 aa14.34□□□□□ -0.11
CLDND1-227ENST00000513452 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms