RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 BIN1O00499 593 aa20.15■□□□□ 0.82
ARHGEF28-212ENST00000513042 ISM2Q6H9L7 571 aa20.15■□□□□ 0.82
ARHGEF28-212ENST00000513042 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
ARHGEF28-212ENST00000513042 DAPK1P53355 1430 aa20.15■□□□□ 0.82
ARHGEF28-212ENST00000513042 SHTN1A0MZ66 631 aa20.14■□□□□ 0.82
ARHGEF28-212ENST00000513042 ANAPC15P60006 121 aa20.14■□□□□ 0.82
ARHGEF28-212ENST00000513042 TRMT1LQ7Z2T5 733 aaKnown RBP20.14■□□□□ 0.82
ARHGEF28-212ENST00000513042 USP25Q9UHP3 1055 aa20.14■□□□□ 0.82
ARHGEF28-212ENST00000513042 LUZP1Q86V48 1076 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 CCDC91Q7Z6B0 441 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 GOLGA8AA7E2F4 631 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 GOLGA8BA8MQT2 603 aa20.14■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZNF213O14771 459 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 IFFO1Q0D2I5 559 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 CNNM3Q8NE01 707 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 NLRP5P59047 1200 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZPR1O75312 459 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 MACROD2A1Z1Q3 448 aa20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
ARHGEF28-212ENST00000513042 GJB2P29033 226 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 TDRD12Q587J7 1177 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 HECW1Q76N89 1606 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 C16orf45Q96MC5 204 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 NME9Q86XW9 330 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 FSIP1Q8NA03 581 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 KIF18AQ8NI77 898 aa20.12■□□□□ 0.81
ARHGEF28-212ENST00000513042 TMC6Q7Z403 805 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 INCENPQ9NQS7 918 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 TSHZ3Q63HK5 1081 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 GSTTP1A0A1W2PQM5 241 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 GBP3Q9H0R5 595 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 TFIP11Q9UBB9 837 aaKnown RBP20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 IFIT3O14879 490 aaKnown RBP20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF28-212ENST00000513042 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 IFIT5Q13325 482 aaKnown RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 SCAND2PQ9GZW5 306 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 CETN2P41208 172 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 PPP4R3AQ6IN85 833 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 RRP9O43818 475 aaKnown RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 MAP3K12Q12852 859 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 RNF187Q5TA31 235 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 SLC5A1P13866 664 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 USP8P40818 1118 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 SH2B1Q9NRF2 756 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 ZNF652Q9Y2D9 606 aa20.1■□□□□ 0.81
ARHGEF28-212ENST00000513042 MYCNP04198 464 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF28-212ENST00000513042 TRIM21P19474 475 aaKnown RBP20.09■□□□□ 0.81
ARHGEF28-212ENST00000513042 EMILIN1Q9Y6C2 1016 aa20.09■□□□□ 0.81
ARHGEF28-212ENST00000513042 TMEM266Q2M3C6 531 aa20.09■□□□□ 0.81
ARHGEF28-212ENST00000513042 PLEKHH2Q8IVE3 1493 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 GPTP24298 496 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 CUL5Q93034 780 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 TBC1D2Q9BYX2 928 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 VAT1LQ9HCJ6 419 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 MAP9Q49MG5 647 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 LIMCH1Q9UPQ0 1083 aa20.08■□□□□ 0.81
ARHGEF28-212ENST00000513042 ALDH1L2Q3SY69 923 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 YEATS4O95619 227 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 CCDC196A0A1B0GTZ2 297 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 HAND2P61296 217 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 MTIF2P46199 727 aaKnown RBP20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 GOLIM4O00461 696 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 GIMAP7Q8NHV1 300 aa20.07■□□□□ 0.8
ARHGEF28-212ENST00000513042 KIF2AO00139 706 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 VPS36Q86VN1 386 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 DNAAF4Q8WXU2 420 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 WDR78Q5VTH9 848 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 KCNH5Q8NCM2 988 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 MAP3K2Q9Y2U5 619 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 RPGRIP1LQ68CZ1 1315 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 ZFP91Q96JP5 570 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
ARHGEF28-212ENST00000513042 ADCY5O95622 1261 aa20.05■□□□□ 0.8
ARHGEF28-212ENST00000513042 CGNQ9P2M7 1197 aaKnown RBP20.05■□□□□ 0.8
ARHGEF28-212ENST00000513042 TMCO5BA8MYB1 307 aa20.05■□□□□ 0.8
ARHGEF28-212ENST00000513042 USO1O60763 962 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms