RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
DDX41-211ENST00000510171 KLRG1Q96E93 195 aa14.12□□□□□ -0.15
DDX41-211ENST00000510171 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
DDX41-211ENST00000510171 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
DDX41-211ENST00000510171 STARD3NLO95772 234 aa14.11□□□□□ -0.15
DDX41-211ENST00000510171 LMNB1P20700 586 aa14.11□□□□□ -0.15
DDX41-211ENST00000510171 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
DDX41-211ENST00000510171 TTLL6Q8N841 843 aa14.11□□□□□ -0.15
DDX41-211ENST00000510171 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
DDX41-211ENST00000510171 ZC3H4Q9UPT8 1303 aaKnown RBP14.11□□□□□ -0.15
DDX41-211ENST00000510171 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
DDX41-211ENST00000510171 H0YIN7 160 aa14.1□□□□□ -0.15
DDX41-211ENST00000510171 DIAPH1O60610 1272 aaKnown RBP14.1□□□□□ -0.15
DDX41-211ENST00000510171 RASSF7Q02833 373 aa14.1□□□□□ -0.15
DDX41-211ENST00000510171 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
DDX41-211ENST00000510171 JMYQ8N9B5 988 aa14.1□□□□□ -0.15
DDX41-211ENST00000510171 BCL2L12Q9HB09 334 aa14.1□□□□□ -0.15
DDX41-211ENST00000510171 COL15A1P39059 1388 aa14.09□□□□□ -0.15
DDX41-211ENST00000510171 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
DDX41-211ENST00000510171 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
DDX41-211ENST00000510171 VEGFAP15692 232 aaPredicted RBP14.09□□□□□ -0.15
DDX41-211ENST00000510171 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
DDX41-211ENST00000510171 TTC5Q8N0Z6 440 aa14.09□□□□□ -0.15
DDX41-211ENST00000510171 A0A087WZG4 1122 aa14.08□□□□□ -0.16
DDX41-211ENST00000510171 EIF5P55010 431 aaKnown RBP14.08□□□□□ -0.16
DDX41-211ENST00000510171 PRELPP51888 382 aa14.07□□□□□ -0.16
DDX41-211ENST00000510171 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
DDX41-211ENST00000510171 TEX13AQ9BXU3 409 aaPredicted RBP14.07□□□□□ -0.16
DDX41-211ENST00000510171 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
DDX41-211ENST00000510171 ZNF622Q969S3 477 aaKnown RBP eCLIP14.06□□□□□ -0.162e-8■■□□□ 13.2
DDX41-211ENST00000510171 PDZRN3Q9UPQ7 1066 aa14.06□□□□□ -0.16
DDX41-211ENST00000510171 KIF7Q2M1P5 1343 aa14.06□□□□□ -0.16
DDX41-211ENST00000510171 TJP1Q07157 1748 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 PDE6BP35913 854 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 TEFQ10587 303 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 TBC1D9BQ66K14 1250 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
DDX41-211ENST00000510171 BRIP1Q9BX63 1249 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 MRC1P22897 1456 aa14.05□□□□□ -0.16
DDX41-211ENST00000510171 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
DDX41-211ENST00000510171 NFKBIEO00221 500 aa14.04□□□□□ -0.16
DDX41-211ENST00000510171 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
DDX41-211ENST00000510171 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
DDX41-211ENST00000510171 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
DDX41-211ENST00000510171 NPM2Q86SE8 214 aaKnown RBP14.04□□□□□ -0.16
DDX41-211ENST00000510171 GAS2L2Q8NHY3 880 aa14.04□□□□□ -0.16
DDX41-211ENST00000510171 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
DDX41-211ENST00000510171 C21orf2O43822 256 aa14.03□□□□□ -0.16
DDX41-211ENST00000510171 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
DDX41-211ENST00000510171 BRCA1P38398 1863 aaKnown RBP14.03□□□□□ -0.16
DDX41-211ENST00000510171 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.17
DDX41-211ENST00000510171 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.17
DDX41-211ENST00000510171 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
DDX41-211ENST00000510171 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
DDX41-211ENST00000510171 CCDC24Q8N4L8 307 aa14.02□□□□□ -0.17
DDX41-211ENST00000510171 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.17
DDX41-211ENST00000510171 SETDB2Q96T68 719 aa14.02□□□□□ -0.17
DDX41-211ENST00000510171 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
DDX41-211ENST00000510171 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 HEG1Q9ULI3 1381 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 NPHP1O15259 732 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 A1BGP04217 495 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
DDX41-211ENST00000510171 POTECB2RU33 542 aa14□□□□□ -0.17
DDX41-211ENST00000510171 CNKSR1Q969H4 720 aa14□□□□□ -0.17
DDX41-211ENST00000510171 SCN11AQ9UI33 1791 aa14□□□□□ -0.17
DDX41-211ENST00000510171 CAMTA2O94983 1202 aa13.99□□□□□ -0.17
DDX41-211ENST00000510171 TNS4Q8IZW8 715 aa13.99□□□□□ -0.17
DDX41-211ENST00000510171 CNBD1Q8NA66 436 aa13.99□□□□□ -0.17
DDX41-211ENST00000510171 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
DDX41-211ENST00000510171 ST5P78524 1137 aa13.98□□□□□ -0.17
DDX41-211ENST00000510171 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
DDX41-211ENST00000510171 DZIP3Q86Y13 1208 aaKnown RBP13.98□□□□□ -0.17
DDX41-211ENST00000510171 TAOK3Q9H2K8 898 aa13.98□□□□□ -0.17
DDX41-211ENST00000510171 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
DDX41-211ENST00000510171 LTBP3Q9NS15 1303 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 KCNQ3O43525 872 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
DDX41-211ENST00000510171 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
DDX41-211ENST00000510171 SRGNP10124 158 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 SOGA3Q5TF21 947 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 PHACTR3Q96KR7 559 aa13.97□□□□□ -0.17
DDX41-211ENST00000510171 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
DDX41-211ENST00000510171 CAPN15O75808 1086 aa13.96□□□□□ -0.17
DDX41-211ENST00000510171 DDNO94850 711 aaPredicted RBP13.96□□□□□ -0.17
DDX41-211ENST00000510171 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
DDX41-211ENST00000510171 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
DDX41-211ENST00000510171 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 CEMIPQ8WUJ3 1361 aa13.95□□□□□ -0.18
DDX41-211ENST00000510171 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
DDX41-211ENST00000510171 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
DDX41-211ENST00000510171 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms