RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FLAD1Q8NFF5 587 aa17.93■□□□□ 0.46
SNF8-206ENST00000509989 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
SNF8-206ENST00000509989 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 A1BGP04217 495 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
SNF8-206ENST00000509989 VSIG10Q8N0Z9 540 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
SNF8-206ENST00000509989 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
SNF8-206ENST00000509989 APAF1O14727 1248 aa17.91■□□□□ 0.46
SNF8-206ENST00000509989 GYS1P13807 737 aa17.91■□□□□ 0.46
SNF8-206ENST00000509989 NLGN2Q8NFZ4 835 aa17.91■□□□□ 0.46
SNF8-206ENST00000509989 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
SNF8-206ENST00000509989 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
SNF8-206ENST00000509989 POLD1P28340 1107 aa17.89■□□□□ 0.45
SNF8-206ENST00000509989 FKBP8Q14318 412 aa17.89■□□□□ 0.45
SNF8-206ENST00000509989 COL15A1P39059 1388 aa17.89■□□□□ 0.45
SNF8-206ENST00000509989 KIAA1551Q9HCM1 1747 aa17.89■□□□□ 0.45
SNF8-206ENST00000509989 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
SNF8-206ENST00000509989 RFC4P35249 363 aa17.88■□□□□ 0.45
SNF8-206ENST00000509989 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
SNF8-206ENST00000509989 BCL2L12Q9HB09 334 aa17.88■□□□□ 0.45
SNF8-206ENST00000509989 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
SNF8-206ENST00000509989 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
SNF8-206ENST00000509989 NBPF26B4DH59 902 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 MMP10P09238 476 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 ADRA2BP18089 450 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
SNF8-206ENST00000509989 KRT24Q2M2I5 525 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 USPL1Q5W0Q7 1092 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 NBPF10Q6P3W6 841 aaKnown RBP17.87■□□□□ 0.45
SNF8-206ENST00000509989 NBPF15Q8N660 670 aa17.87■□□□□ 0.45
SNF8-206ENST00000509989 DDR1Q08345 913 aa17.86■□□□□ 0.45
SNF8-206ENST00000509989 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
SNF8-206ENST00000509989 BCORQ6W2J9 1755 aa17.86■□□□□ 0.45
SNF8-206ENST00000509989 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
SNF8-206ENST00000509989 STARD3NLO95772 234 aa17.85■□□□□ 0.45
SNF8-206ENST00000509989 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
SNF8-206ENST00000509989 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
SNF8-206ENST00000509989 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
SNF8-206ENST00000509989 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
SNF8-206ENST00000509989 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
SNF8-206ENST00000509989 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
SNF8-206ENST00000509989 WWC3Q9ULE0 1092 aa17.84■□□□□ 0.45
SNF8-206ENST00000509989 NARFQ9UHQ1 456 aa17.83■□□□□ 0.44
SNF8-206ENST00000509989 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
SNF8-206ENST00000509989 TEX13AQ9BXU3 409 aaPredicted RBP17.82■□□□□ 0.44
SNF8-206ENST00000509989 CHL1O00533 1208 aa17.81■□□□□ 0.44
SNF8-206ENST00000509989 TM4SF1P30408 202 aa17.81■□□□□ 0.44
SNF8-206ENST00000509989 NLGN1Q8N2Q7 840 aa17.81■□□□□ 0.44
SNF8-206ENST00000509989 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
SNF8-206ENST00000509989 LMOD3Q0VAK6 560 aa17.8■□□□□ 0.44
SNF8-206ENST00000509989 NFIXQ14938 502 aa17.8■□□□□ 0.44
SNF8-206ENST00000509989 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
SNF8-206ENST00000509989 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
SNF8-206ENST00000509989 NUP98P52948 1817 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
SNF8-206ENST00000509989 ZPR1O75312 459 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 ANXA1P04083 346 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
SNF8-206ENST00000509989 BRCA1P38398 1863 aaKnown RBP17.79■□□□□ 0.44
SNF8-206ENST00000509989 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
SNF8-206ENST00000509989 ZNF853P0CG23 659 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 C10orf71Q711Q0 1435 aa17.78■□□□□ 0.44
SNF8-206ENST00000509989 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.442e-6■■□□□ 12.9
SNF8-206ENST00000509989 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
SNF8-206ENST00000509989 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 MYL6BP14649 208 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 PDIA6Q15084 440 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 DZIP3Q86Y13 1208 aaKnown RBP17.76■□□□□ 0.43
SNF8-206ENST00000509989 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
SNF8-206ENST00000509989 CCDC24Q8N4L8 307 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
SNF8-206ENST00000509989 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
SNF8-206ENST00000509989 HLFQ16534 295 aa17.75■□□□□ 0.43
SNF8-206ENST00000509989 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
SNF8-206ENST00000509989 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SNF8-206ENST00000509989 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
SNF8-206ENST00000509989 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
SNF8-206ENST00000509989 UTRNP46939 3433 aa17.73■□□□□ 0.43
SNF8-206ENST00000509989 CHD4Q14839 1912 aa17.73■□□□□ 0.43
SNF8-206ENST00000509989 A0A087WZG4 1122 aa17.73■□□□□ 0.43
SNF8-206ENST00000509989 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SNF8-206ENST00000509989 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
SNF8-206ENST00000509989 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
SNF8-206ENST00000509989 SERPINB2P05120 415 aa17.72■□□□□ 0.43
SNF8-206ENST00000509989 DPEP1P16444 411 aa17.72■□□□□ 0.43
SNF8-206ENST00000509989 KCNA3P22001 575 aa17.72■□□□□ 0.43
SNF8-206ENST00000509989 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms