RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 NBPF7P0C2Y1 421 aaPredicted RBP13.37□□□□□ -0.27
SEC31A-228ENST00000509142 TUBGCP6Q96RT7 1819 aa13.37□□□□□ -0.27
SEC31A-228ENST00000509142 LTN1O94822 1766 aa13.37□□□□□ -0.27
SEC31A-228ENST00000509142 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
SEC31A-228ENST00000509142 PTMSP20962 102 aa13.37□□□□□ -0.27
SEC31A-228ENST00000509142 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 ESYT1Q9BSJ8 1104 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 AXIN2Q9Y2T1 843 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 NEK4P51957 841 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 NFAT5O94916 1531 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
SEC31A-228ENST00000509142 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
SEC31A-228ENST00000509142 NUCB2P80303 420 aa13.35□□□□□ -0.27
SEC31A-228ENST00000509142 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
SEC31A-228ENST00000509142 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
SEC31A-228ENST00000509142 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
SEC31A-228ENST00000509142 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
SEC31A-228ENST00000509142 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
SEC31A-228ENST00000509142 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
SEC31A-228ENST00000509142 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
SEC31A-228ENST00000509142 CHMLP26374 656 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
SEC31A-228ENST00000509142 ESPNB1AK53 854 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
SEC31A-228ENST00000509142 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
SEC31A-228ENST00000509142 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 PXDNLA1KZ92 1463 aa13.34□□□□□ -0.27
SEC31A-228ENST00000509142 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
SEC31A-228ENST00000509142 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 IL25Q9H293 177 aa13.33□□□□□ -0.28
SEC31A-228ENST00000509142 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
SEC31A-228ENST00000509142 NSFL1CQ9UNZ2 370 aaKnown RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.28
SEC31A-228ENST00000509142 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
SEC31A-228ENST00000509142 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
SEC31A-228ENST00000509142 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 POLA2Q14181 598 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
SEC31A-228ENST00000509142 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
SEC31A-228ENST00000509142 ALDH1L1O75891 902 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
SEC31A-228ENST00000509142 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
SEC31A-228ENST00000509142 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 ERBB3P21860 1342 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 AOX1Q06278 1338 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 KIAA1211Q6ZU35 1233 aa13.31□□□□□ -0.28
SEC31A-228ENST00000509142 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
SEC31A-228ENST00000509142 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 MYL6BP14649 208 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 MCM2P49736 904 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 C1orf167Q5SNV9 1468 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
SEC31A-228ENST00000509142 ADCY9O60503 1353 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 ZNF142P52746 1687 aaPredicted RBP13.3□□□□□ -0.28
SEC31A-228ENST00000509142 PXDNQ92626 1479 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
SEC31A-228ENST00000509142 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 ZSCAN23Q3MJ62 389 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 PPP1R9BQ96SB3 815 aa13.3□□□□□ -0.28
SEC31A-228ENST00000509142 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC31A-228ENST00000509142 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 ZNF445P59923 1031 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
SEC31A-228ENST00000509142 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
SEC31A-228ENST00000509142 RBSNQ9H1K0 784 aa13.29□□□□□ -0.28
SEC31A-228ENST00000509142 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
SEC31A-228ENST00000509142 ANAPC15P60006 121 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
SEC31A-228ENST00000509142 RGPD2P0DJD1 1756 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 PRPF40AO75400 957 aaKnown RBP13.28□□□□□ -0.28
SEC31A-228ENST00000509142 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.282e-7■□□□□ 10.2
SEC31A-228ENST00000509142 TMX3Q96JJ7 454 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
SEC31A-228ENST00000509142 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
SEC31A-228ENST00000509142 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
SEC31A-228ENST00000509142 GRM8O00222 908 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms