RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.33
TRIM41-204ENST00000508930 CNTROBQ8N137 903 aa17.08■□□□□ 0.33
TRIM41-204ENST00000508930 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.33
TRIM41-204ENST00000508930 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
TRIM41-204ENST00000508930 CCDC112Q8NEF3 446 aa17.08■□□□□ 0.32
TRIM41-204ENST00000508930 KCNF1Q9H3M0 494 aa17.08■□□□□ 0.32
TRIM41-204ENST00000508930 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
TRIM41-204ENST00000508930 TNNT1P13805 278 aa17.08■□□□□ 0.32
TRIM41-204ENST00000508930 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
TRIM41-204ENST00000508930 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 NCKAP5LQ9HCH0 1330 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 FLIIQ13045 1269 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
TRIM41-204ENST00000508930 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
TRIM41-204ENST00000508930 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
TRIM41-204ENST00000508930 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
TRIM41-204ENST00000508930 PTPRMP28827 1452 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 KRT85P78386 507 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 RUFY3Q7L099 469 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 CCDC30Q5VVM6 783 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 FBXO31Q5XUX0 539 aaPredicted RBP17.06■□□□□ 0.32
TRIM41-204ENST00000508930 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
TRIM41-204ENST00000508930 FEZ1Q99689 392 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
TRIM41-204ENST00000508930 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
TRIM41-204ENST00000508930 IL25Q9H293 177 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
TRIM41-204ENST00000508930 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 RAD50Q92878 1312 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 AP5Z1O43299 807 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 FOXO3O43524 673 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 TYRO3Q06418 890 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 OGFRQ9NZT2 677 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
TRIM41-204ENST00000508930 LRMPQ12912 555 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 RUFY2Q8WXA3 655 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 SGSM2O43147 1006 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 CDC42BPGQ6DT37 1551 aa17.04■□□□□ 0.32
TRIM41-204ENST00000508930 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
TRIM41-204ENST00000508930 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
TRIM41-204ENST00000508930 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
TRIM41-204ENST00000508930 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
TRIM41-204ENST00000508930 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-204ENST00000508930 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-204ENST00000508930 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
TRIM41-204ENST00000508930 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
TRIM41-204ENST00000508930 SMTNL1A8MU46 457 aa17.02■□□□□ 0.32
TRIM41-204ENST00000508930 PDE4CQ08493 712 aa17.02■□□□□ 0.32
TRIM41-204ENST00000508930 FAM173BQ6P4H8 233 aa17.02■□□□□ 0.32
TRIM41-204ENST00000508930 ANKRD7Q92527 254 aa17.02■□□□□ 0.32
TRIM41-204ENST00000508930 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.32
TRIM41-204ENST00000508930 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
TRIM41-204ENST00000508930 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
TRIM41-204ENST00000508930 SRGAP3O43295 1099 aa17.02■□□□□ 0.31
TRIM41-204ENST00000508930 LARGE1O95461 756 aa17.02■□□□□ 0.31
TRIM41-204ENST00000508930 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.31
TRIM41-204ENST00000508930 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
TRIM41-204ENST00000508930 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
TRIM41-204ENST00000508930 DACT1Q9NYF0 836 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 MAP2P11137 1827 aaKnown RBP17.01■□□□□ 0.31
TRIM41-204ENST00000508930 TCHHQ07283 1943 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
TRIM41-204ENST00000508930 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
TRIM41-204ENST00000508930 NRBP1Q9UHY1 535 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 ATP7BP35670 1465 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 RAB11FIP3O75154 756 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 LIG1P18858 919 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
TRIM41-204ENST00000508930 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 TTC14Q96N46 770 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 CLIP2Q9UDT6 1046 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
TRIM41-204ENST00000508930 CBX8Q9HC52 389 aa17■□□□□ 0.31
TRIM41-204ENST00000508930 AOX1Q06278 1338 aa16.99■□□□□ 0.31
TRIM41-204ENST00000508930 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
TRIM41-204ENST00000508930 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
TRIM41-204ENST00000508930 LSG1Q9H089 658 aaKnown RBP16.99■□□□□ 0.31
TRIM41-204ENST00000508930 CTIFO43310 598 aaKnown RBP16.99■□□□□ 0.31
TRIM41-204ENST00000508930 PDCP20941 246 aa16.99■□□□□ 0.31
TRIM41-204ENST00000508930 ZNF165P49910 485 aa16.99■□□□□ 0.31
TRIM41-204ENST00000508930 NAA30Q147X3 362 aaPredicted RBP16.99■□□□□ 0.31
TRIM41-204ENST00000508930 TAF3Q5VWG9 929 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms